Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3790 |
Symbol | |
ID | 5744742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4644421 |
End bp | 4645233 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641294902 |
Product | glutamate racemase |
Protein accession | YP_001560876 |
Protein GI | 160881908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0490998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATA AATCTGCAAT TGGAGTTTTT GATTCTGGTA TTGGTGGTCT TACGGTAACT AAGGAAATTA TGAATCAATT ACCTAAGGAG CAAATCATAT ATTTTGGAGA TACTGCTCGA TTACCATACG GTAGTAAGTC AAAGGCAACC ATAACAATGT ACTCCAGACA AATCATTCGT TTTTTATTGA CGAAGGATGT AAAAGCGATT GTGATAGCAT GTAATACAGC AAGTGCCCAT GCTCTTGAAA CAGTGAGAAA AGAAATAGAG ATACCAATCA TCGGTGTTAT TAACCCGGGT GCCAAAGTAG CAGCTGAGAC AACGAGAAAT GGTAATATTG GGGTGATTGC TACCGAAGGC ACGATACGAA GTGGTATTTA TAACGAGTTT TTAGGAGAAA TTCGTCCTGA TCTTCGAGTG TTTGGTAAGG CTTGTCCTTT ATTTGTACCT TTGGTAGAAG AGGGCTGGAT TGATGATCCT ATTACGAAAG AAGTTGTAAG TAGGTATATT CAAGAACTTT TATATAAAGA TATTGATACC TTAATTCTTG GTTGTACTCA CTATCCTTTG CTTCGAAAGG TGATTCGTGA GGTGGTTGGT GATGGAATAG AGCTAGTAAA TCCAGCTTAT GAAACAGCCA GAACCTTAAA GCATGTATTA GAAGAACAAA AATTGCTATC GGAAGAAACA ACGACACCAG AACATACCTT TTTTGTCAGT GATGGTGCAG AGAAATTCCG TAACTTTGCA AATACGATAT TACCATGTGA AATAATTGAA ACGAAGGATG TTAACATAAA GACTTTTGAA TAA
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Protein sequence | MSNKSAIGVF DSGIGGLTVT KEIMNQLPKE QIIYFGDTAR LPYGSKSKAT ITMYSRQIIR FLLTKDVKAI VIACNTASAH ALETVRKEIE IPIIGVINPG AKVAAETTRN GNIGVIATEG TIRSGIYNEF LGEIRPDLRV FGKACPLFVP LVEEGWIDDP ITKEVVSRYI QELLYKDIDT LILGCTHYPL LRKVIREVVG DGIELVNPAY ETARTLKHVL EEQKLLSEET TTPEHTFFVS DGAEKFRNFA NTILPCEIIE TKDVNIKTFE
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