Gene Cphy_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3780 
Symbol 
ID5744732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4632622 
End bp4633419 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content39% 
IMG OID641294892 
ProductABC transporter related 
Protein accessionYP_001560866 
Protein GI160881898 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000137492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAG TGGAACACAT TTCTAAAACC TTTCGAGTGA GCAGAAGAAA TTCTGGATTT 
AAAGAAGCAA CAAAAGCGTT GTTTCATCGT GAATACGAAG AATTAAAAGC ACTCGATGAC
ATCTCTTTTA CGATAGCTGA CGGTGAAATG GTTGGCTATA TCGGTCCTAA TGGTGCAGGG
AAAAGCAGCA CCATCAAAAT TTTAAGTGGA ATCTTATATC CGGATTCCGG TACCTGTTTA
GTAAATGGAA GAATTCCTTG GAAGGAACGA AAGGCTCATG TGAAAGACAT CGGAGTCGTT
TTTGGGCAGC GCTCGCAGCT ATGGTGGGAT GTCCCTGTCA TTGATTCGTT TGAACTTTTA
AAGGATATTT ACGACATTCC ATTGACTACT TACCGGGATA ATTTAGAGGA ACTGATTACA
CTTCTTAATT TATCTCAAAT AATAAAAACT CCAACAAGAC AATTATCACT AGGGCAGCGG
ATGCGCTGTG AAATAGCAGC ATCTCTTCTT CATGAGCCTA AAATCTTATT TTTGGATGAA
CCAACAATAG GACTTGATGC TATATCAAAG CTGGCGGTGC GTGATTTTAT TAGGAAACGA
AATGAAACAC ATAAAACGAC GGTTATCTTA ACGACTCATG ATATGCAAGA TATTGAAGCC
TTGTCAAAAC GAATCATCTT AATTGGCAAA GGCAGACTCT TGATGGATGG AACCCTTGAT
GAATTAAAAG CTGTGAAAGC GGAGGATTCA ATTGATGAAG TAATTGCTTC GATGTATCGG
AAATATGATA TCGCATAA
 
Protein sequence
MIEVEHISKT FRVSRRNSGF KEATKALFHR EYEELKALDD ISFTIADGEM VGYIGPNGAG 
KSSTIKILSG ILYPDSGTCL VNGRIPWKER KAHVKDIGVV FGQRSQLWWD VPVIDSFELL
KDIYDIPLTT YRDNLEELIT LLNLSQIIKT PTRQLSLGQR MRCEIAASLL HEPKILFLDE
PTIGLDAISK LAVRDFIRKR NETHKTTVIL TTHDMQDIEA LSKRIILIGK GRLLMDGTLD
ELKAVKAEDS IDEVIASMYR KYDIA