| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3719 |
|---|
| Symbol | |
|---|
| ID | 5742918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4571963 |
|---|
| End bp | 4573135 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294831 |
|---|
| Product | phosphopentomutase |
|---|
| Protein accession | YP_001560805 |
|---|
| Protein GI | 160881837 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1015] Phosphopentomutase |
|---|
| TIGRFAM ID | [TIGR01696] phosphopentomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG TATTTTTAAT TGTCTTAGAC AGTGTAGGTA TTGGCGAAAT GCCAGATGCA
GCGAATTATA AAGATGAAGG TAGCAATACC TTAAAAGCAG CCGCTAAAAG TGAATTTTTT
TCAACCCCTA ATTTAGAAAA GCTAGGACTT TTTCATATGG ACGGGTTAAC TGATATGGCA
AATAGCAAAG TGGTACCTCA GGCTACTTAT GCTAGAATGA ACGAAGCATC AAAGGGTAAG
GATACAACCA TCGGACATTG GGAGATTTCA GGAATTATTT CTGAAAAACC TCTTCCTACA
TTTCCAGAAG GGTTCCCTAA GGAACTTTTG GATGAGTTTG AAAAGAGAAC AGGTAGAAAA
GTTATTTGTA ACAAGCCATA CTCAGGTACT GAAGTAATTA AAGATTATGG AAAAGAGCAT
GTGGAAACAG GAGCTTTAAT TGTATATACC TCTGCAGACA GTGTATTCCA AATTGCAGCT
CATGAAGGTG TAGTTCCAAT TGAAGAATTA TATCGCTATT GCGAAATCGC AAGAGAAATT
TGCAAGGGTC CAACAGGAGT AGGTCGTGTT ATTGCAAGAC CATTTGAAGG GGAGTATCCA
GACTACAGAA GAACTGCAAA ACGTCATGAC TATTCTTTAC AGCCACCAAG AGATACTATG
CTAAATCAAT TAAAAGAAGC AGGTTATTCT GTGCTTGCTG TTGGTAAAAT AAATGATATC
TTCGCAGGTA GTGGTGTTAC AGAGATGGTT TATACAAAGA ATAATGCAGA AGGTATCGAA
GAGACATTAA AATATCAAAA GAAGGAATTC GAAGGTTTAT GCTTTGTAAA CTTAGTTGAT
TTTGATATGG TATATGGTCA TCGTAATGAT GTGGATGGCT ACGCAAAGGC GTTATCTTAT
TTTGATGAGC AACTTCCAAG ATTTTTAGAA TCCATGCAGG AAGAGGATAT CTTAATGATT
ACTGCTGACC ATGGTTGTGA TCCTTCCACT CCATCTACAG ATCATTCCAG AGAGTACACA
CCTCTAATTG TTTATGGAAA CCAGATTAAA GGAAATACTA ATTTAGGAAC AAGAAAAACT
TTTGCTGATA TTGGATCTGC CATTCTAGAG TACTTTAATG TTCCAAGTAG AATTCAAGGA
GAATCATTCC TAGAGGAATG TATGAAAAAA TAA
|
|---|
| Protein sequence | MKRVFLIVLD SVGIGEMPDA ANYKDEGSNT LKAAAKSEFF STPNLEKLGL FHMDGLTDMA
NSKVVPQATY ARMNEASKGK DTTIGHWEIS GIISEKPLPT FPEGFPKELL DEFEKRTGRK
VICNKPYSGT EVIKDYGKEH VETGALIVYT SADSVFQIAA HEGVVPIEEL YRYCEIAREI
CKGPTGVGRV IARPFEGEYP DYRRTAKRHD YSLQPPRDTM LNQLKEAGYS VLAVGKINDI
FAGSGVTEMV YTKNNAEGIE ETLKYQKKEF EGLCFVNLVD FDMVYGHRND VDGYAKALSY
FDEQLPRFLE SMQEEDILMI TADHGCDPST PSTDHSREYT PLIVYGNQIK GNTNLGTRKT
FADIGSAILE YFNVPSRIQG ESFLEECMKK
|
|---|
| |