Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3692 |
Symbol | |
ID | 5742716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4540603 |
End bp | 4541295 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641294802 |
Product | ribosomal protein L1 |
Protein accession | YP_001560778 |
Protein GI | 160881810 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000151678 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG GAAAGAAATA TACTGATTCA GCAAAGCTTA TCGACAGAAC TGCTCAATAT GATGTTGCTG ACGCAATCAG TTTAGTAAGA AAATCTGCAG TAGCTAAATT CGATGAGACA ATCGAAGCGC ACATCAGACT TGGTGTAGAC GGACGTCACG CTGACCAACA GGTTCGTGGA GCGGTAGTAT TACCACACGG AACTGGTAAA ACAGTTAGAG TTCTTGTATT TGCTAAGGGG GATAAGGTAA ATGAAGCTTT AGCAGCAGGC GCTGACTTCG TGGGTGGCGA TGAGTTAATT CCAAAGATCC AGAACGATGG ATGGTTTGAA TTTGACGTTG TAGTTGCAAC TCCAGACATG ATGGGTGTAG TTGGTCGTCT TGGTCGTGTA CTTGGACCTA AGGGCTTAAT GCCAAACCCT AAGGCAGGAA CAGTTACTAT GGATGTTACT AAGGCTGTTA ATGATATCAA GGCCGGTAAA ATCGAATATA GATTGGATAA GACAAACATT ATCCACGTGC CAGTTGGTAA AGCTTCCTTT ACCGAAGAAC AACTCGCAGA CAACTTCCAA GCGCTTATGG GTGCAATCAT CAAGGCTAAA CCTGCTGCAG CTAAGGGACA GTATTTAAGA AGCGTAACAG TCGCATCTAC AATGGGCCCT GGAATCAAGC TTAACACAAG TAAATTAGCA TAA
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Protein sequence | MKRGKKYTDS AKLIDRTAQY DVADAISLVR KSAVAKFDET IEAHIRLGVD GRHADQQVRG AVVLPHGTGK TVRVLVFAKG DKVNEALAAG ADFVGGDELI PKIQNDGWFE FDVVVATPDM MGVVGRLGRV LGPKGLMPNP KAGTVTMDVT KAVNDIKAGK IEYRLDKTNI IHVPVGKASF TEEQLADNFQ ALMGAIIKAK PAAAKGQYLR SVTVASTMGP GIKLNTSKLA
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