Gene Cphy_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3578 
Symbol 
ID5742982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4417348 
End bp4418718 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content30% 
IMG OID641294689 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001560666 
Protein GI160881698 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA AATATAATAA CGATTATAGA TTAAATGTGT TTTCACCGAT TACTACGGAT 
GGAAAGGAAT ATACGTTTGG CATTGAAGGT GATTTGTCCT CAGGAACGGT AAAAAAGTAC
GCGCTTACAA AAGAACAGGA GTCCACCCTT GAGGAAATGA TTAATGGAAA AGAGTATACA
AAGGAATACC TGATAGAAAA GTGGGGAAAA GAAACATTAG AGGATTTAAT TAAAAAAGGT
ACTTTCATAA ACTATCAAAT AGATACAGAG GGAATATACT CTAGATCAAA AGCTTATTAT
AGTATAAACA AGTACGGTAA TGTACAGGAA AAATTAAGTG CAGCCAAAGT ATTAATACTT
GGTTGTGGAG GCATAGGAAG TCATGTAGCA TGGAACTTAA CTGTCTTAGG TGTGGGTGAG
ATTACATTAG TTGATTTTGA TGTAGTAGAG GAAAGCAATC TTAATCGACA GTTATTATAT
ACAAAAGATG ATATTGGAAA TCAAAAAGTA GAGGTGTTGG GGGAAAAATT AAAGGCAATA
AACCCCAATA TAGTAATTAA TATAAAGAAA ATGAAGATAT CTTCATCAGA AGAACTAGAT
GAGTTATGCA AGCAGTACAC TTGTAACCTA ATTATCAAAA CCCTGGACTC ACCAAAAGAT
TTTTCAAAAT GGTTAGATGA AATATGTAAG TTACGAAAAA TATGTTATAT AACAGGAATA
ACAACAAGTA TACATTCCTT AATTGGACCT ACTTTTATAC CTGATAAATC TAAAGGTTTT
AGTGAAATTT TTAATGTTGG GACTGAGTTT GAGACCATTG TAGGGACAAT GCCATCTCTT
GGAATTGTAA TGTATCATAT TTCAAGTGAA ATTTCACAGG AGGCATTTAA GATTTTAGCT
GGAGTGGGTA CACCTAAATA TATTAATAAA ATACTTGCAG AAGACATTAT TATAGGAAAG
TCAATGTATA TTTATCCTAA AAATATTAAT CTAGAAAAAG ATCCATTGAG TAAAGCTATA
TTTAGCAATG TAAATTTCAT GTTTTTATTT GGTATTGTAT TAGCTTTTGC ATTTACCCAA
TTACCCTGGT TACCTTTAGT AGGGTATCTG TGTTCGATTT TATTTGCGCT ATTTACATAT
GAAACAATAC AGGAAAGAGT TAAGTGTGCA TTGGTTAATA ACACAATATA TATGTTATTT
AACTTAGTAA CCGTAATTAG TTTGAATGGT GAGAACTTAG GTATTCTAGA AATTTTGATT
TCTATACTCA TAATCATTAG TATAAGCTCT ATTTTTACTT GCTTTATTAC TCAAATTCTC
CATATTATTT TGGATAAGAC TAAACATATT CTATCTAGAT CTAATGGGTG A
 
Protein sequence
MINKYNNDYR LNVFSPITTD GKEYTFGIEG DLSSGTVKKY ALTKEQESTL EEMINGKEYT 
KEYLIEKWGK ETLEDLIKKG TFINYQIDTE GIYSRSKAYY SINKYGNVQE KLSAAKVLIL
GCGGIGSHVA WNLTVLGVGE ITLVDFDVVE ESNLNRQLLY TKDDIGNQKV EVLGEKLKAI
NPNIVINIKK MKISSSEELD ELCKQYTCNL IIKTLDSPKD FSKWLDEICK LRKICYITGI
TTSIHSLIGP TFIPDKSKGF SEIFNVGTEF ETIVGTMPSL GIVMYHISSE ISQEAFKILA
GVGTPKYINK ILAEDIIIGK SMYIYPKNIN LEKDPLSKAI FSNVNFMFLF GIVLAFAFTQ
LPWLPLVGYL CSILFALFTY ETIQERVKCA LVNNTIYMLF NLVTVISLNG ENLGILEILI
SILIIISISS IFTCFITQIL HIILDKTKHI LSRSNG