Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3556 |
Symbol | |
ID | 5742960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4389160 |
End bp | 4390671 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641294667 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001560644 |
Protein GI | 160881676 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000444514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAG TGGCAGAGGA GAATAAGGTT CAAAACGCAA ATAACGCGCA AGATGTAAAT GAATTAATTA AAGTAAAAAT GCAAAAGCTT GCTGATTTAC AAGAAGCAGG AAAAGATCCG TTTCAGATTA TGAAGTATGA TGTGACTCAT CATACTATAG ATGTCAAAGA TAACTTTGAG AATTTAGAAG GTCAAATCGT AGCAATTGCT GGTAGAATTA TGACAAAGCG AGTGATGGGT AAAGCTTCCT TTATCAATAT TCAGGACAAG CTTGGTAATA TTCAATCCTA TATTCAAAGA GACAGCATAG GTGAGGAAGA ATATGCTGGA TTTAAGAAGT TTGATATCGG TGATATCGTA GGTATCAAAG GAGAGGTATT CAAAACACAC GCAGGGGAAA TCTCAGTACG TGCAAATGAA ATTCTTCTAT TATCAAAATG TTTACAAGTA TTACCTGAAA AGTTCCATGG TTTAACAGAT ACAGATACAA GATATCGTCA AAGATATGTA GACTTAATGA TGAATCCAGA AGTAAAAGAG ACATTTATTA AGCGTTCTGC AATCATCCGT GAAATCCGTA ATTATTTAGA TGGAGAAGAC TTTATTGAAG TAGAAACTCC AGTTTTAGTT AAGAATGCAG GTGGTGCTGC TGCAAGACCA TTTATGACAC ATCACAATTC TTTAGATGAA GACTTAAACC TAAGAATATC CTTAGAATTA TATTTAAAGA GATTGATTGT TGGTGGTTTA GAAAGAGTAT ATGAAATCGG TAGAGTATTC CGTAACGAAG GCTTATCTGT TCGTCATAAC CCTGAATTTA CTCTACTTGA GTTATATCAA GCATACACTG ATTATAACGG AATGATGGAT TTAACAGAAA AATTATTCCG TACCGTGGCA GAAAAAGTAA TTGGTACAAC AAAGATTTCC TATGAAGGTG TTGAAATCGA CTTAGGCAAA CCATTTGAGC GTATTACCAT GGTAGAAGCA GTAAAGAAAT ATAAAGGTAT TGACTTTGAT CAGGTTAAGA CAGAAGAAGA GGCTAAGGCT CTTGCAAAAG AGCATCATGT TTCTTTTGAA GACAGACATA AAAAGGGTGA TATCTTAAGC TTATTCTTCG AAGAATTTGT AGAAGAGCAT CTAATACAAC CAACCTTTGT AATAGATCAT CCAGTTGAAA TTTCTCCACT TACAAAGAAG AAACCAGAGA ACCCAGAGTA CACAGAGCGA TTTGAGTTGT TTGTGACTAA GAGAGAAATG GCAAATGCAT ACTCTGAGTT AAATGATCCA ATCGATCAAA GAGAACGTTT TGTGGCACAA GAAGCATTAA AAGCTGCTGG AGATGAGGAA GCAAACTCCA TGGACGAAGA TTTCCTAAAT GCATTAGCAT ATGGTATGCC TCCAACTGGT GGTATCGGTA TTGGAATCGA CCGTCTCGTA ATGTTATTAA CGGATTCTTC TGCAATCCGC GATGTATTAT TGTTCCCTAC TATGAAGAGC CTAGATAAAT AA
|
Protein sequence | MKTVAEENKV QNANNAQDVN ELIKVKMQKL ADLQEAGKDP FQIMKYDVTH HTIDVKDNFE NLEGQIVAIA GRIMTKRVMG KASFINIQDK LGNIQSYIQR DSIGEEEYAG FKKFDIGDIV GIKGEVFKTH AGEISVRANE ILLLSKCLQV LPEKFHGLTD TDTRYRQRYV DLMMNPEVKE TFIKRSAIIR EIRNYLDGED FIEVETPVLV KNAGGAAARP FMTHHNSLDE DLNLRISLEL YLKRLIVGGL ERVYEIGRVF RNEGLSVRHN PEFTLLELYQ AYTDYNGMMD LTEKLFRTVA EKVIGTTKIS YEGVEIDLGK PFERITMVEA VKKYKGIDFD QVKTEEEAKA LAKEHHVSFE DRHKKGDILS LFFEEFVEEH LIQPTFVIDH PVEISPLTKK KPENPEYTER FELFVTKREM ANAYSELNDP IDQRERFVAQ EALKAAGDEE ANSMDEDFLN ALAYGMPPTG GIGIGIDRLV MLLTDSSAIR DVLLFPTMKS LDK
|
| |