Gene Cphy_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3486 
Symbol 
ID5743598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4299694 
End bp4300455 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content39% 
IMG OID641294598 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001560576 
Protein GI160881608 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000172262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATC AATTTTCAAG ATCAGAGCTG TTATTAGGCA CAGAAGGAAT GGAAAAGTTA 
TCAAAAGCGA GAGTTGCGGT ATTTGGGATT GGTGGTGTTG GTAGTTATAC AGTGGAAGCA
CTTGCGCGAA GCGGTGTTGG TACTTTTGAT ATATTCGATG ATGATAAAGT TTGTCTAACG
AATATAAACA GACAGTTGAT AGCAACAAGA AAGACCGTTG GAAAGTACAA AGTGGATGTA
ATGAAGGAAA GAATTCTTGA GATAAATCCG AATGCTATTG TGAATACGCA TCAGTGCTTT
TTTATGCCAG AAAATGCTGG CAATTTTGAT TTTAGCGAGT ATACTTATGT TGTGGATGCT
GTTGATACTG TTACTGCAAA AATTGAACTA GTTTTACGTG CCAATCAAGC AAATACAAGA
ATCATAAGTT GCATGGGTGC AGGGAATAAA TTAGACCCTA CCAGGTTCGA GGTTACCGAT
ATTTATAAAA CATCAGTATG TCCGCTTGCA AAGGTAATGC GTAAGGAGTT AAAGACTAGG
GGGATTAAAA AGTTAAAGGT GGTATATTCA AAGGAGCCTG TTAGACAGCC TCTTTCTGAT
ATGGCACTTA GTTGTAAAAC TGGATGTATC TGCCCTCCTG GAGCAGAGAG AAAGTGTACC
CAAAGAAGAG CAATCCCTGG AAGTACCTCC TTTGTACCAT CGGTAGCAGG ACTCATTATT
GCAGGTGAAG TGGTTAAAGA TATCATTGGG ATTACGGAAT AA
 
Protein sequence
MLNQFSRSEL LLGTEGMEKL SKARVAVFGI GGVGSYTVEA LARSGVGTFD IFDDDKVCLT 
NINRQLIATR KTVGKYKVDV MKERILEINP NAIVNTHQCF FMPENAGNFD FSEYTYVVDA
VDTVTAKIEL VLRANQANTR IISCMGAGNK LDPTRFEVTD IYKTSVCPLA KVMRKELKTR
GIKKLKVVYS KEPVRQPLSD MALSCKTGCI CPPGAERKCT QRRAIPGSTS FVPSVAGLII
AGEVVKDIIG ITE