| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3475 |
|---|
| Symbol | |
|---|
| ID | 5743587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4280248 |
|---|
| End bp | 4282776 |
|---|
| Gene Length | 2529 bp |
|---|
| Protein Length | 842 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641294587 |
|---|
| Product | Ig domain-containing protein |
|---|
| Protein accession | YP_001560565 |
|---|
| Protein GI | 160881597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000102294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GAAACGCGAG ATTCATAGCT ATTGCGGTGA TGCTTGCAGT GATGTTCAGT
ACAATAGCAG TAAGTCAGCC AGTGAATACA TATGCTGCTA CCATTGCGTT GAATGCAACC
AGTAAGACAG TGGTAGTGGG CAATACATAT ACACTGTCTA TAAATAATGC TACGAATATG
TCCAAAACCA CATGGAAATC TTCGAATATT AAAATTGCCA CAGTTAATGG TAAGGGACTT
GTAACTCCAG TCACAGCAGG AACTGCAACA ATAACTGCAA CTGTTTATTT CAAAGATGGT
ACTCAGAAAC AGTTAGATAG TAAGGTAACT GTAAAGAAGC GTATCCCAGC TACTGGTGTT
GAGCTTAACG TAGTTTATGA CGAAATTAAT GCTCATATTA TTGAAGTTGG AGGTAAATAT
GACTTCGATA CAAAGTTAAC ACCAGCAACT TCCACAGACT CTACTTTTTA TAGTATCTCA
GATACTACCT ATGCTACAGT AGATTCTGCA GGTATTGTTA CTGGCAAGAA ACCTGGAATT
ACTGTGTTAG AAGCAAGAAT TGGTTTAAAT AAGACGGAAG CAATGAAATC TACCAACACG
GTTGTTGCGA GAACCTATAT ATTAATTAGA CCTAAGTCTA GTACGACTCC TACTCCAACA
GCAACTCCAA AACCTACACC AGTAGCAGAA CCAAAAGCAA TTGGAGTAAC CTTAATTAGT
TCACAAGAAA TTTTAGTTAA TTTTAATTGT CAGTTAAGTA AGTCAAGTAT TATTGATAAA
AATGGAAATC TAATTTCTGG GGCAATAACA ATAACTCCTG GCAATGGAGC AACTCCTGTT
GGTAACTTAA GTGCTAAGTT ATCAGATGAT ATGAGTGGAA TCCATATTAT GTCAAGCGGT
GAGTTTTCAG GTACTTATGT AGTTACTGTG TTTAATAAAG TAAATGCATT AGATGGAACT
CCTGTTCAGG CAACATCTTT CCAGAATGAT TTTGAAGATA CGATTGGACC AATGTATACA
GAGACAAAAA TTAGCGACGA TGGATATCAG GCAAAGATAT ACTTCAATGA AGCAGTCGAT
GTATCTGAGT TGAAGATTTT AAAGGTACAA GGAGATAATG ATACTGTAGT TCAGACTTAT
CTTGGTGATG TAAGAAATTA TTCACTTAGT GCGGATAAGA AATACCTTAT AATTGATTTA
AGGACAATTG GTAAAAAAGT TGTTGATACC CTAGTCGAGA TTACTGGAGT AAAAGACTTA
AAGGGAAATG CAGCTATTCA GTTCCCTATG TCAGTAGTAG TGAAATGTGA TGCTTCTGAA
AAACCGCTAG CAGGTATTGT TAAAGTTGAA AGAATAAATA AGACAATTTT AGAAGCAACA
TTCAGTAAGC CAATTCAAAT GGGTGGTTAT GCAAAAATTG ATGGTGCTAC CGTATATGGA
TCAGTAGTTA CAGAGGATAA TACTAAGGTA CAGTATACAA TTCCAAATCA GGCGCTTACT
GGCACGCAGT CAGTTACATT TACCGGATGG TATAACTATA ATGCAAGTTA TTCTTCTATG
GCTAATCAGT CAATTGCTGT GAATTTTACT TTAGACAAGA CTCCACCAAA TTTAATGGCT
TATGAGCTTA CAAGCGTAGT AGAAAACAAA ATAACTGTGA ATAAGCTTGT ATTAACTTTT
GACAAGATTG TAAGCTTAAC AAATGTTGCA GGTGCGATTG AAGGATCATT ATATGGTAGT
AATGGAAATA TATCATCTAA CGGATATGCT TATACAGGTA CTGTGACTGA TAAAGTCGTT
ACCTTAACAT TCACTAATAA AACATTAGAA GCAGGAACAT ATACATTTAA TATTCCTAAA
GATTTTGTAA TCGATAATTT AGGTAATGGT TCATTGCAGC AAAGTGTTCA GATTATTAAA
TCAGCAGGCT CCTCAACAGC ATTACCTGCA CCAGTGTCTA TTGTTCAAGA TGTAGCAAAC
CCAAGTAAGA TAAGGGTGAC TTTTAATAAT AAACTTGATA TTGCAAGTGC GACAAATGTT
TCTAATTATA TTTTAGGATC CTATATTACA CCATTTAGTG CTGTGATTTT AGAACAAAAT
GATACCAAAG CAGTAGTAGA GCTTACATTC CAGAATGGAG TAATATCTAC AACCGGTTCC
TATGCATTTA AGGTTCTTAA TGTTAAGGGC TACAATGGAA CTTATAGTGA GATGAAACAA
TACAATACTG TTGTAACACT TACTGAAAAT ACAACAGCAT CAATTATTTC TTGTAAGCAA
ACTTCAGCAT ATTGTGTTGA AATCGTTATG TCAAAGCAGA TTAGCGGAAC AGGGACATTC
CAAGTATTTA ATGGAACTAG CTTAGTAAAT GTATCAAGTA CTTTTGTAAA TGGTAATACC
ATTTATGTGG CATTTAAAGA TTCCATCCCA AATGCTAGCT ATCTGTTATT AATAAGTAAT
TACTTTGTTG ATAATAATGG AAATCCAGTT TCACTTGGTT CCCCTATTAT GATTCAAAAA
GCTAACTAA
|
|---|
| Protein sequence | MKKRNARFIA IAVMLAVMFS TIAVSQPVNT YAATIALNAT SKTVVVGNTY TLSINNATNM
SKTTWKSSNI KIATVNGKGL VTPVTAGTAT ITATVYFKDG TQKQLDSKVT VKKRIPATGV
ELNVVYDEIN AHIIEVGGKY DFDTKLTPAT STDSTFYSIS DTTYATVDSA GIVTGKKPGI
TVLEARIGLN KTEAMKSTNT VVARTYILIR PKSSTTPTPT ATPKPTPVAE PKAIGVTLIS
SQEILVNFNC QLSKSSIIDK NGNLISGAIT ITPGNGATPV GNLSAKLSDD MSGIHIMSSG
EFSGTYVVTV FNKVNALDGT PVQATSFQND FEDTIGPMYT ETKISDDGYQ AKIYFNEAVD
VSELKILKVQ GDNDTVVQTY LGDVRNYSLS ADKKYLIIDL RTIGKKVVDT LVEITGVKDL
KGNAAIQFPM SVVVKCDASE KPLAGIVKVE RINKTILEAT FSKPIQMGGY AKIDGATVYG
SVVTEDNTKV QYTIPNQALT GTQSVTFTGW YNYNASYSSM ANQSIAVNFT LDKTPPNLMA
YELTSVVENK ITVNKLVLTF DKIVSLTNVA GAIEGSLYGS NGNISSNGYA YTGTVTDKVV
TLTFTNKTLE AGTYTFNIPK DFVIDNLGNG SLQQSVQIIK SAGSSTALPA PVSIVQDVAN
PSKIRVTFNN KLDIASATNV SNYILGSYIT PFSAVILEQN DTKAVVELTF QNGVISTTGS
YAFKVLNVKG YNGTYSEMKQ YNTVVTLTEN TTASIISCKQ TSAYCVEIVM SKQISGTGTF
QVFNGTSLVN VSSTFVNGNT IYVAFKDSIP NASYLLLISN YFVDNNGNPV SLGSPIMIQK
AN
|
|---|
| |