| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3463 |
|---|
| Symbol | |
|---|
| ID | 5743575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4262906 |
|---|
| End bp | 4263427 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641294575 |
|---|
| Product | UvrB/UvrC protein |
|---|
| Protein accession | YP_001560553 |
|---|
| Protein GI | 160881585 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3880] Uncharacterized protein with conserved CXXC pairs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000125325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATGTG ATATTTGCGG AAAGAAAGAA GCGAAAATCT ACTATACGGA AATCCTAAAC
GGAAAGAAAA CAGAACAGCA TCTGTGTTCC GAATGCGCTG CGAAAAACAG TTCATTCCTA
AATTTTCCAC AGGGGGATGG TAGTGATCCC ACTTTAGGCG GAATGTTATT TGAATTACTT
GAGAGTATTG AAAAACAACA AAATGAGGAA GAAATCCCGA TTACTAAATG TAAAAGCTGT
GGGTTAAGCT ATGAAGAATT TTTAAAACAA GGAAAATTTG GTTGTGCAGA TTGCTATAGC
AGTTTTGGTA AGGTACTAAA TAAAAACTTT AGAAGTATTC ATGGAGCAGA CACTCATACC
GGTAAAAAGC CAAAGGGCTA TGAAAGTGAA ATGAATCGTC TTATAAATGA ACTTTCAGAA
GAGGAAAAAC TAACAATTCA ATTGCAACAG GCGATTGAAC AGGAAGAATA TGAGGAAGCA
GCAAGAATAA GAGATCGAAT CCGAGAACTT AAGAAGGTTT AA
|
|---|
| Protein sequence | MLCDICGKKE AKIYYTEILN GKKTEQHLCS ECAAKNSSFL NFPQGDGSDP TLGGMLFELL
ESIEKQQNEE EIPITKCKSC GLSYEEFLKQ GKFGCADCYS SFGKVLNKNF RSIHGADTHT
GKKPKGYESE MNRLINELSE EEKLTIQLQQ AIEQEEYEEA ARIRDRIREL KKV
|
|---|
| |