Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3459 |
Symbol | |
ID | 5743571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4257281 |
End bp | 4258639 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641294571 |
Product | DNA repair protein RadA |
Protein accession | YP_001560549 |
Protein GI | 160881581 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.261832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA AAAGTACCGT ATTCTTTTGT AAAGAGTGTG GGTTTGAATC TACAAAATGG GTAGGACAAT GTCCAGGATG TAAATCATGG AACAGCTTTA CGGAAGAACC TGTTGTCAAA AAGACACCGG TGAATAAAGC TAGTAGCAGA AAAACAGAAA CACCAAAATA CCTCTCTGAG GTATGTACGG AAGAAGAAAA TCGAACCGTA ACAGGAATTG GCGAATTAGA CCGTGTTCTT GGTGGCGGTA TCGTAAAAGG ATCTTTAGTT TTAGTCGGTG GAGATCCGGG TATTGGAAAA TCCACACTTC TTCTTCAGAT GTGCAGACAA TTGACTACGG CTAAAAAGAA GGTACTATAT GTTTCCGGAG AGGAATCTCA ACAACAAATT AAAATGAGAG CAGAGCGCCT TGGAACCTTC CAAGGCGAAC TGCTATTACT TTCTGAAACA AACCTTGATC AGATTGAGGA TATTGTATCA AAAGATACTC CTGAGATAAT GATAATTGAC TCGATCCAAA CAATGTTTAA AGAAGAAATC AGTGCATCCC CAGGAAGTGT AAGCCAAGTA CGAGAATCCA CAGGAGCCTT AATGCATTTA GCAAAAGGTA TGGGGATATC GATATTTATT GTTGGGCATG TGACGAAGGA AGGCGTTGTT GCTGGACCAC GAGTCTTAGA GCATATGGTA GATACGGTAC TATATTTTGA AGGGGATAAT ACTGCTGCTT ATCGAATCCT TAGAGCGGTG AAAAACCGTT TTGGTTCCAC GAATGAAATC GGTGTGTTTG AAATGAAAAA TTCAGGATTG GCAGAAGTAA TGAATCCTTC CGAGTATATG CTTCAAGGAA AACCAGAGGA TGAACCAGGG TCTGTTGTGG CAGCTTCTAT GGAAGGGACA AGAACCATGT TAGTTGAAGT ACAAGCTTTG GTTTGTCAAT CCAACTTAAA TATGCCCCGT AGAACAGCAG CAGGAACCGA TTATAATCGT GTGAATTTAT TGATGGCGGT TATTGAAAAA CGATTAGGGA TACAGTTATC TTTTTGTGAT GCTTATGTAA ATGTTGCAGG TGGAATGAAA ATAAATGAGC CTGCCCTAGA TTTAGCTATC GTGATGGCGC TAATATCCAG CTACAAGAAT AGAGCACTAA GTAGTAAAAC ACTTGTGTTT GGAGAAGTAG GTCTTACGGG AGAAGTACGT GCTGTAAGTA TGGCGGAACA GCGTGTTAAC GATGCAAAGA AGATGGGCTA TGAAATTTGT ATTTTACCAC AGGTGAATCA GCAGCATTTA AAGATACAGG GAATCCGTCT TATTGGTGTT AATAACGTCA GAGAATTATT TAAATTATTA CAGGATTAA
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Protein sequence | MAKKSTVFFC KECGFESTKW VGQCPGCKSW NSFTEEPVVK KTPVNKASSR KTETPKYLSE VCTEEENRTV TGIGELDRVL GGGIVKGSLV LVGGDPGIGK STLLLQMCRQ LTTAKKKVLY VSGEESQQQI KMRAERLGTF QGELLLLSET NLDQIEDIVS KDTPEIMIID SIQTMFKEEI SASPGSVSQV RESTGALMHL AKGMGISIFI VGHVTKEGVV AGPRVLEHMV DTVLYFEGDN TAAYRILRAV KNRFGSTNEI GVFEMKNSGL AEVMNPSEYM LQGKPEDEPG SVVAASMEGT RTMLVEVQAL VCQSNLNMPR RTAAGTDYNR VNLLMAVIEK RLGIQLSFCD AYVNVAGGMK INEPALDLAI VMALISSYKN RALSSKTLVF GEVGLTGEVR AVSMAEQRVN DAKKMGYEIC ILPQVNQQHL KIQGIRLIGV NNVRELFKLL QD
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