Gene Cphy_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3451 
Symbol 
ID5743563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp4246002 
End bp4246562 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content32% 
IMG OID641294564 
Productintegrase family protein 
Protein accessionYP_001560543 
Protein GI160881575 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0127606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTG AACCAATCAG AGATAAGAAT AAAATTAAAC TAATGCAGCA ATTCTTATCT 
GGGAAAGATT TACGCTATGC CACAATATTT AATTTTGGAT TAAATACAGG TTTAAGAATC 
AGTGATATCT TACCCCTTAA AGTTAGCGAT ATATTAACGA AAAATGGTGA ATTTCGTGAT 
TATCTTGTGA TTAATGAGAA AAAAACAAAA AAAGAGAAGA AGATTAAGCT GAACAATGCA 
CTACGAAAAT CATTAAATAA ATATATTAAA GAATATGAAT TAGGACACCA AGATTACCTG 
TTTCCAAGCA AAAAAGGCGC CTATATTGGG AGAATTCAAG CATATCGAGT ATTAAAGGAA 
GCTGCTGAAT TATTTCATAT AGAAAATTTC GGAACACACA GCCTACGAAA AACATGGGGC 
TATTGGACAT ACAAGATGTC AAAATATAAT ATTGGCTTAA TAATGGATAC CTTTAACCAT 
AGTTCTCAAA GTATTACCTT GCGATACATT GGGGTAAACC AGGATCAAAA AGATGAGCTT 
TATTCGCTTG TCCAATTTTA A
 
Protein sequence
MTVEPIRDKN KIKLMQQFLS GKDLRYATIF NFGLNTGLRI SDILPLKVSD ILTKNGEFRD 
YLVINEKKTK KEKKIKLNNA LRKSLNKYIK EYELGHQDYL FPSKKGAYIG RIQAYRVLKE 
AAELFHIENF GTHSLRKTWG YWTYKMSKYN IGLIMDTFNH SSQSITLRYI GVNQDQKDEL 
YSLVQF