Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3277 |
Symbol | |
ID | 5741556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3987515 |
End bp | 3988447 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294378 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001560370 |
Protein GI | 160881402 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0377359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA GGGTATTATC AATTATTATT TGCTTATGTA TGTTTTTTGT GGCAGCATGT TCTAAAGATA CGGCTACAGG TGGATCTAGC ACGAAAGGCA AAGATAATAA ATACAAGGTA TATTTAATAA CGATGGATCA GATGGATCAA CATTGGGTTA ATGTAGATGC AGGATGTAAA AAAGCAGTGA AAGAGCTTGG CAATATTGAT TATGAATGGT TAGCTCCTGA CGTGAAAGAC GATGCAAAGC AGATTGAGTG TATCAATAAT GCTGTAGCAG GCGGAGCTAA CGCTATCCTT CTTGCAGCAA ATGGTCCTGA TGCAGTTACC TCTGCATTAA AAGAAGCACA ATCAGCAGGC GTAAAAATCA TCTATGTTGA CTCAGCAGCT GATTATCCAG CTATTCAGAC ATTGGCAACT GATAATGAAG CAGCAGGTAA AACTGCCGGG GAAGAGATGA TGAAAGGCCT AACAGCAGCA GGAATAAAAG AAGGGAAAAT TGGTATTGTT AATGTTAATG CAGCTACAGC ATCATGTGTA GCCCGTGAAA AAGGTTTCCG TTCTGCATTT GAAGGAACCT CCTTTGAATT ACTTGGGACA CAATATGGTG AAGGCGATGC AGCTAAATCT AAGGATATAG CAGCGAACTA TATAACTTCA AGTTGTGTTG GCTTATTTGG TGCAAATGAA GGTTCTACCG TAGGTATTGG TATTGCAATT GAGGAAGCAG GAGAAAAGAT TATTGGTGTG GGATTTGATA AATCAGATAC AATCCTTGAA TTAATTAAAG GCGGACATCT CCTTTGTACT ATGGCTCAAA ACCCTGATGT AATGGGCTAT GAGGGTATGA AAACAGCAGC AAAAGCATTG GCTGGTGAAA AAATAGGAGA AACTAATATT GATACAGGAG TATCCGTTAT TACAAAGGAT TGA
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Protein sequence | MKKRVLSIII CLCMFFVAAC SKDTATGGSS TKGKDNKYKV YLITMDQMDQ HWVNVDAGCK KAVKELGNID YEWLAPDVKD DAKQIECINN AVAGGANAIL LAANGPDAVT SALKEAQSAG VKIIYVDSAA DYPAIQTLAT DNEAAGKTAG EEMMKGLTAA GIKEGKIGIV NVNAATASCV AREKGFRSAF EGTSFELLGT QYGEGDAAKS KDIAANYITS SCVGLFGANE GSTVGIGIAI EEAGEKIIGV GFDKSDTILE LIKGGHLLCT MAQNPDVMGY EGMKTAAKAL AGEKIGETNI DTGVSVITKD
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