Gene Cphy_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3179 
Symbol 
ID5743267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3882857 
End bp3883609 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content31% 
IMG OID641294280 
Productmethyltransferase type 11 
Protein accessionYP_001560273 
Protein GI160881305 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0194529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA CTAAAGTATT AGCTCAAAAT AAGACAAGTT GGGATTTCAT AGCCGATGAA 
TGGTTTGGAT CAACTTCACT ACCTACATAC GGTCCAACTT TACCTAATGA AGGTACATTG
AATTTGTTTG ATTCATTAGA TAATAAAAAA GTTTTAGAGA TTGGTTGCGG CAGTGGACAT
TCTTTGCTAT ATACAGCTAA ACAGGGGGCT AAAGAGTTAT GGGGTTTAGA TTTATCTTCA
AAACAGATAG AGAATGCTGA AAAACTGCTA TCAGAAAATA ACGTAATTGC AAATTTATTT
GTGTCACCTA TGGAAGATAA CCCAGGAATA CCAGAAAATT ACTTTGATTT TGTTTACTCG
ATATATGCAT TTGGGTGGAC TACCGATTTA AAACAATCCA TAGATTTAGT TCATAAATAC
TTAAAGAAAT CTGGTGTTTT TATATTGTCT TGGGATAATC CATTGATGCA ATGTATAGAA
GCTGAAGGGA ATAAGTATAC AATTTTCAGG TCGTATTTGG ATGAAGCTAC GATTGATTTA
TCAAAGGGTA ATCAAGCTAT GAAAATAAAG AACTGGAAAT TATCTTCATA TATCAATGAA
CTGGCATCTG CAGGATTTAA AATTGACAAG TTGATTGAAG AAACTGATAA GGATATTCTT
GCCCAGGAAT ATGATTTTAC ACTAAAATAC TATTCAAAGC ATAAAGCTAA ATTAATTAAT
ACATCGTTTA TTATCAAAGC AATTAAATTA TAA
 
Protein sequence
MKDTKVLAQN KTSWDFIADE WFGSTSLPTY GPTLPNEGTL NLFDSLDNKK VLEIGCGSGH 
SLLYTAKQGA KELWGLDLSS KQIENAEKLL SENNVIANLF VSPMEDNPGI PENYFDFVYS
IYAFGWTTDL KQSIDLVHKY LKKSGVFILS WDNPLMQCIE AEGNKYTIFR SYLDEATIDL
SKGNQAMKIK NWKLSSYINE LASAGFKIDK LIEETDKDIL AQEYDFTLKY YSKHKAKLIN
TSFIIKAIKL