Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3121 |
Symbol | |
ID | 5743207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3818169 |
End bp | 3818723 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641294221 |
Product | rubrerythrin |
Protein accession | YP_001560216 |
Protein GI | 160881248 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00426378 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTC AAAACGCTAT GACAAGTGAC TTTTTACATT CCGCATATGG CGGAGAAAGC TTAGCTCATA TGAGATATTT AACATGGGCT AAGATTGCAG AAAAGGAAGG CTTTAAGAAC ATTGCAAGAT TATTTGAAGC AATCGCATAT GCTGAGTTGG TTCATGCGAA CAATCATTTT CGTGAAATTG ATGGAGAGAT GGCAGATGCA ACTGTAACAG CAGGTGGTGT ATTCGGTAAT GGTAAAACAG TGGATAACCT TCAAGGAGCA ATTAATGGTG AACTCCACGA AGTAGAGCAG ATGTACCCAG TATATTTAAA TACTGCCGAG TTTCAAGGAG AAAAAGGTGC ACAGCGTTCC TTCCATTTCG CGTTAGAAGC AGAAAAAATT CATGCTGATA TGTTTGCTAA AGCACAGGAA TGTGCTAAAG AAGGTAAAGA TATGGAATTC ACTTCTGTTC ATATCTGTCC AGTTTGCGGT CATACCATAC TAGATGATGC TCCTGATAAT TGTCCAGTAT GTGGCGCGAA AAAGGAGATG TATAAAGAGT TCTAA
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Protein sequence | MAVQNAMTSD FLHSAYGGES LAHMRYLTWA KIAEKEGFKN IARLFEAIAY AELVHANNHF REIDGEMADA TVTAGGVFGN GKTVDNLQGA INGELHEVEQ MYPVYLNTAE FQGEKGAQRS FHFALEAEKI HADMFAKAQE CAKEGKDMEF TSVHICPVCG HTILDDAPDN CPVCGAKKEM YKEF
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