| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3088 |
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| Symbol | |
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| ID | 5743174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3776055 |
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| End bp | 3777794 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294188 |
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| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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| Protein accession | YP_001560183 |
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| Protein GI | 160881215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.144325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATGA AAGAAATTAT GTTAGGCAAC GAGGCAATCG CAAGAGGTGC TTATGAGGCT
GGTGTAAAAG TTTCAGCAGC TTATCCTGGG ACGCCAAGCA CGGAGATTAG CGAGAATATA
GTGAAGTATA AAGAGATTTA CAGTGAGTGG TCACCAAATG AGAAGGTAGC CATGGAGGTA
GCCATTGGTG CCTCAATTAG CGGTGTTAGA GCTCTTGCCT CTATGAAACA TGTTGGAGTG
AATGTTGCCG CAGATCCTTT ATTTACGATT TCGTATGCTG GTGTGAATGG TGGATTAGTA
CTTGTTGCTG CTGATGACCC TGGATTATAT AGCTCACAAA ATGAACAAGA TACCAGAATG
GTAGCAAGAG CAGCGCAGGT TCCTGTATTA GAACCTTCCG ATAGTGAAGA GGCGAAAGAA
TTTGTTAAAT TTGCATTTGA TATGAGTGAG AAATATGATA CTCCAGTAAT TGTTCGTACC
ACGACGAGAC TTTCTCATTC TCAGGGGATG GTAAATCTAT GTAACAGAAT CGAGGTAGAA
GACAAAGCTT ACATTGGAAA TCCAGCAAAA AATGTAATGA TGCCAGGGAA TGCAAAGGTG
CGTCATCTTG TAGTTGAAGC ACGTACGAAA CAAATGATAG AAGAAGGCTG TGACTTTCCA
ATAAATCAGA TGGAATATAA AGATAAGAGT ATTGGTGTTA TAACAAGTGG TATTCCATAT
CAGTACGTAA AAGAAGCGCT ACCAGAAGCA TCCGTACTTA AACTTGGTAT GGTTAATCCA
CTTCCAAGAA AGCTGATTGA AGAATTCGCA GCTTCTGTAG AGAATTTGTA CATAGTAGAA
GAATTAGATC CTGTCATTGA GGAACAGGTT AAGTCATGGG GAATCAAAGC GATAGGTAAG
GAGATTCTTA CAGTTCAAGG AGAGTATAGT GCAAACCTAT TAAGAAAAGC AATTAAGAAA
GAAGAAATTG AGATAAAACC GGTAGCACAG GTACCAAATC GCCCTCCGGT TCTTTGCCCA
GGATGTCCGC ATCGAAGTGT ATTTTCTGTA TTAAAAAAAT TAGGTATCCA TGCAGCAGGT
GATATTGGAT GTTATACTCT TGGCGCTGTA GCTCCTTTAA ATGTTGTAGA TACTACAGTC
TGTATGGGGG CTAGTATCAG TACCTTACAT GGTATGGAAA AGGCGAAGGG AAAAGAATAC
ATTAAGAACT GGGTTGCCGT CATTGGCGAT TCGACATTTA TGCATACTGG AATTAATTCT
TTAATTAATA TGGTTTATAA CAAGGGAACA GGAACTGTGA TGATCTTAGA TAATTCTACA
ACAGGGATGA CTGGACATCA AGATCATGCA GCAACTGGAA AGACCTTAAT GGGCGAAGAG
ACGATAGCAA TCAGTATTCC TGATTTATGC CGTTCTCTCG GAATTCATAA TGTTATCGAA
GTAAATGCTT TTGATACAAA AGCGTTAGAA AAGATAGTAA AAGAGGAATT AAGGAAGGAT
GAAATCTCTG TAATTATTAC CAAAGCTCCT TGTGTACTCC TAAGTAAGAA ATTAAGTGAT
ACACAGTGTA ACGTAGTTTC TATTAAGTGT AAAAAGTGTG GAATGTGTCT AAAGCCTGGA
TGTCCAGCTA TTACTAAGAA GGAAGATGGT ATCACCGTAA TCAATGAGAC CATGTGTAAT
GGTTGCAATC TATGCTTTGA ACAATGTAAG TTCGGTGCAA TAGAAAAGAT GGGAAGATAG
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| Protein sequence | MQMKEIMLGN EAIARGAYEA GVKVSAAYPG TPSTEISENI VKYKEIYSEW SPNEKVAMEV
AIGASISGVR ALASMKHVGV NVAADPLFTI SYAGVNGGLV LVAADDPGLY SSQNEQDTRM
VARAAQVPVL EPSDSEEAKE FVKFAFDMSE KYDTPVIVRT TTRLSHSQGM VNLCNRIEVE
DKAYIGNPAK NVMMPGNAKV RHLVVEARTK QMIEEGCDFP INQMEYKDKS IGVITSGIPY
QYVKEALPEA SVLKLGMVNP LPRKLIEEFA ASVENLYIVE ELDPVIEEQV KSWGIKAIGK
EILTVQGEYS ANLLRKAIKK EEIEIKPVAQ VPNRPPVLCP GCPHRSVFSV LKKLGIHAAG
DIGCYTLGAV APLNVVDTTV CMGASISTLH GMEKAKGKEY IKNWVAVIGD STFMHTGINS
LINMVYNKGT GTVMILDNST TGMTGHQDHA ATGKTLMGEE TIAISIPDLC RSLGIHNVIE
VNAFDTKALE KIVKEELRKD EISVIITKAP CVLLSKKLSD TQCNVVSIKC KKCGMCLKPG
CPAITKKEDG ITVINETMCN GCNLCFEQCK FGAIEKMGR
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