| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3056 |
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| Symbol | |
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| ID | 5743382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3737655 |
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| End bp | 3739844 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294157 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_001560152 |
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| Protein GI | 160881184 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATTA CATATTCTAA GCAGGAACAT ATTTTTAAAC TAGACACTCC GAATACAACT
TACATGATTG GCCTCATTGA TGAGGAGAAG TTTATTGGTC ATGTGTATTA CGGGAAGAGA
TTGAAAGATA CGAATTTATG CTTCTGGAAA CAGTTGCTTT TGGGACCGCT TCCATCTCGA
AAAAACAGAG ATCGTGTTTC TTTTTTGGAT TCATATCCTC AGGAATATCC AACTCATGGA
ATCGGTGATT TCAGACAATC GGCATTCGAG GTTAAAACCG TATCTGGACA TCGCGCGGTT
AGTATTACAT ATAAAAGCCA TCAAATTTAC CCTGGAAAAC CGAAACTACC TGGTTTACCT
GCTACTTTTG GGAAAGAGGA TAGTTGTACA ACACTTGAAA TTGTTGGTGA GGATAAGCAT
CTAAACCTTG AAGTAGTGCT CTCTTATACG GTGTTTGAGC ATGTTGATGC AATTGCAAGG
AATGTTAGAA TAAAAAATGA GTCAAACGAT TCCATTATGC TTACAAAGGC ATTATCCTTA
TCCTTTGACT TACCAGATAA GGGATACGAA ATGATTACTC TCCATGGGTC TTGGGCGCGT
GAGAGGCAGG TGGAACAAAG AGTTATAGGA CATGGCACGC AAGGTGTTTC CAGTATACGC
GGTGAATCGG GGCATCAAGA ACATCCATTT CTAGCTGTTG TCGGAAAAAA TACGACTGAG
GATGCAGGCG AAGCGTACGG TGTTAGTTTT GTTTACTCCG GAAACTTCAC AGCTTTAACG
GAACGAAATC AATTTGATTT GATAAGGGTA CAGATGGGGA TTAATCCTGT TGATTTTGAG
TGGGAACTAA AACCAAATGA AGAATTTACT ACACCAGAAG CAATCATGGT TTACTCTTCA
GAAGGTATTG GCACTATGTC TAGGAATTTT CATGATCTTT ATCGGAACCA TCTAATTCGT
GGAGAGTACA AGGATAAGAA AAGACCAATC TTAATTAATA ATTGGGAAGC GACGTATTTT
AATTTTACAA CAGAGAAATT GCTTGATATT GCAAGAAATG CATCTAAACT TGGCATCGAA
ATGTTAGTAA TGGATGATGG CTGGTTTGGC AAGAGAAATA ATGATGATTG CGCACTTGGT
GATTGGGTTG TAAATGAAGA AAAGTTACCT GGTGGTTTGG AGTATTTGGT TCAGGAGGTA
AATAAGCTCG GAATGAAATT TGGTATCTGG GTCGAACCAG AGATGATTTC ACCAGATTCT
GAACTCTATC GAAATCATCC AGATTGGGCA ATTCAGATTC CTGGCAGAGA ACCAAGTCAG
TGTAGAGAAC AATTAGTTCT TGATTTCTCT AGAAAAGAAG TACGTGATTA TATTTATCAG
AGGATAAGTA AGATTTTGCA TAGCGCTAAT ATTGAGTATG TTAAATGGGA TATGAATAGG
CCGCTTTGTG ATCTTGGAAG TTATGCTTTA GAAGCTAAGA ATCAAGGTGA GTTAAGTCAT
CGTTATGTCC TTGGTGTTTA TGATGTACAG GAGAGACTAA TCATAGAATT TCCTCATTTG
TTGCTAGAAA ATTGTTCCGG TGGAGGAGCA AGATTTGACC CTGGAATGTT ATATTATAGT
CCGCAAATCT GGTGCTCCGA TGATACGGAT GCTGTGGAGA GACTAAAGAT TCAACGTGGA
ACTGCTATGG TATATCCACT TTCTTGTATG GGTGCTCATG TGAGTGATTG CCCAAATCAT
ACGGTAGGTC GTAACACTCC ATTTGAGACA AGAGGGCATG TAGCTTTGGC TGGTACCTTT
GGTTATGAAC TTGATGTAAC CAAAATATCG AAGGAAGATC AAGAAATGAT TCCGAAACAG
GTTGGATTAT ATCATAATTA CAATGATCTT GTACGAGCTG GAGACTATTA CCGAATTATC
TCTGTACTTG ATGATCCATA CAGAGATTGC TATATGGTAG TAGCAAAGGA TAAGTCTGAA
GCACTTGTAA CCTACGTACA GGTATTCACT CGTCCTAATT TCCAATCTCA TCGGATTTAT
CTAAAAGGAC TTGATCCAGA TGCGAATTAC ATTTGGGAAG AGACAGATTT TATTCAAACG
GGAGAGGCTT ATATGCAGGC TGGAATTGAT ATTTCCGGCC TCTGGGGGGA TTATAAATCC
ATGTTAATCC ATCTGATACG TGTAGAATAG
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| Protein sequence | MGITYSKQEH IFKLDTPNTT YMIGLIDEEK FIGHVYYGKR LKDTNLCFWK QLLLGPLPSR
KNRDRVSFLD SYPQEYPTHG IGDFRQSAFE VKTVSGHRAV SITYKSHQIY PGKPKLPGLP
ATFGKEDSCT TLEIVGEDKH LNLEVVLSYT VFEHVDAIAR NVRIKNESND SIMLTKALSL
SFDLPDKGYE MITLHGSWAR ERQVEQRVIG HGTQGVSSIR GESGHQEHPF LAVVGKNTTE
DAGEAYGVSF VYSGNFTALT ERNQFDLIRV QMGINPVDFE WELKPNEEFT TPEAIMVYSS
EGIGTMSRNF HDLYRNHLIR GEYKDKKRPI LINNWEATYF NFTTEKLLDI ARNASKLGIE
MLVMDDGWFG KRNNDDCALG DWVVNEEKLP GGLEYLVQEV NKLGMKFGIW VEPEMISPDS
ELYRNHPDWA IQIPGREPSQ CREQLVLDFS RKEVRDYIYQ RISKILHSAN IEYVKWDMNR
PLCDLGSYAL EAKNQGELSH RYVLGVYDVQ ERLIIEFPHL LLENCSGGGA RFDPGMLYYS
PQIWCSDDTD AVERLKIQRG TAMVYPLSCM GAHVSDCPNH TVGRNTPFET RGHVALAGTF
GYELDVTKIS KEDQEMIPKQ VGLYHNYNDL VRAGDYYRII SVLDDPYRDC YMVVAKDKSE
ALVTYVQVFT RPNFQSHRIY LKGLDPDANY IWEETDFIQT GEAYMQAGID ISGLWGDYKS
MLIHLIRVE
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