Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3028 |
Symbol | |
ID | 5743354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3698864 |
End bp | 3700276 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294129 |
Product | Alpha-L-fucosidase |
Protein accession | YP_001560124 |
Protein GI | 160881156 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAT TAGATGAAAG ACTTATAAAA ATTGTTCCGT CTGCTAGGCA GATTATGATG CAAAAAACAG AATTCTATGC ATTCTTTCAT TTTACTGTAA ATACCTTTAC CGGAGAAGAA TGGGGACACG GAACAGAGTC ACCGGAAATT TTCAATCCCA CTAGGATGGA TGCAGACCAA TGGGTTGAAG CAATAAAAGC TGCTGGAATG AAAGGAGCAA TCCTTACTTG TAAGCACCAT GACGGATTTT GCCTATGGCC TAGTAAATAT ACGAAGCATT CTGTGAAATA CAGTCCTTAT CAGAATGGAA AAGGCGATAT TGTAAAAGAA GTAGCAGAAG CTTGTAAGAA AGCCGGCTTG AAATTCGGTA TTTATCTTTC TCCATGGGAT CGTAATCAGG AAACTTATGG ACAAGGGAAA GCATATGATG ATTATTTTGT AGCACAGCTT ACGGAACTAC TTACCGGATA TGGAGATATT TTTAGTGTAT GGTTTGATGG TGCCTGCGGA GAAGGCCCTA ATGGTAAAAA ACAGGTTTAT GATTGGCTGC GTTATTATGA TAAGATAAGA AAATATATGC CTGATGCTTG TATTGCCGTA AGCGGTCCTG ATGTTCGTTG GTGTGGCAAT GAGGCAGGCG ATACCCGTGA TAGTGAATGG AGCGTTGTAC CTGCAGACTT ATCGGTAGCA GAGCGAGTGG CTGCTTTAAG CCAGCATGAG GATGATCCGT CTTTTAGGCA GAGGGTAATA AGCAGTATGG AGCAGGACTT AGGAAGCAGA GAACGCTTAG CTAAGGAACA GGACTTAATC TGGTATCCAG CAGAAGTGGA TGTATCGATA AGACCAGGCT GGTTTTATCA TCCTGAAGAG GATGGTAAAG TTCGTTCTCT TGATAATCTA CTTGATATCT ACGAAAAGTC TGTAGGGGGT AATACAACAC TTCTTTTAAA TATTCCTCCT ATGCCAAATG GACTAATCAA CGAGACTGAC GTTAAAAGGC TACGGGAGCT TGGTGAGGAA ATACAAAAAA GATATGGTAA GAACCTGACA GATGGAGCTT TAATTCAGGT AAAAGAAGAA AATGATTGGA AAGCAGTAGA TAGTGTACAA AAGGATGACT ATGAGACCTA CTATCAAGGA ATTGGTACAC AGGCTGAGTT TAAGATTTCT TTTCATAATC CACAAAAGAT TTCATCAGTT ATTTTAAAAG AAAACATATT AAAGAGTCAG AGAATCGAAG CTTTTGAGAT TTTATCTATG ATAAATGGAA ATCTTGTAAA TATCTATGTG GGAACTACGG TTGGTTATAA GAAAATTGCA CGTTTTCCGC AGATAGAATC GGATATACTT ATTATACGAA TTTTAGATTC TAGGATGGAG CCTACTTTTT CGTTCATTGG TATATATGAA TAA
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Protein sequence | MKQLDERLIK IVPSARQIMM QKTEFYAFFH FTVNTFTGEE WGHGTESPEI FNPTRMDADQ WVEAIKAAGM KGAILTCKHH DGFCLWPSKY TKHSVKYSPY QNGKGDIVKE VAEACKKAGL KFGIYLSPWD RNQETYGQGK AYDDYFVAQL TELLTGYGDI FSVWFDGACG EGPNGKKQVY DWLRYYDKIR KYMPDACIAV SGPDVRWCGN EAGDTRDSEW SVVPADLSVA ERVAALSQHE DDPSFRQRVI SSMEQDLGSR ERLAKEQDLI WYPAEVDVSI RPGWFYHPEE DGKVRSLDNL LDIYEKSVGG NTTLLLNIPP MPNGLINETD VKRLRELGEE IQKRYGKNLT DGALIQVKEE NDWKAVDSVQ KDDYETYYQG IGTQAEFKIS FHNPQKISSV ILKENILKSQ RIEAFEILSM INGNLVNIYV GTTVGYKKIA RFPQIESDIL IIRILDSRME PTFSFIGIYE
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