| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2999 |
|---|
| Symbol | |
|---|
| ID | 5744061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3660007 |
|---|
| End bp | 3660447 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641294100 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001560095 |
|---|
| Protein GI | 160881127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000025471 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAAG ATATAAAAGC TTATCAACAT AAAGTACAGT ACTATGAAAC AGATCAGATG
GGAATTGTTC ATCACTCAAA TTATATTCGT TGGTTTGAGG AAGCAAGAAC CGATATGCTA
GAACAAGTCG GTTTTACTTA TCAAATGATG GAAGAGTGTG GAGTGATAAT ACCGGTAATT
GGTGTAAATT GTGAATATAA ATCAATGGTA AGATTTAATG ATATTGTTAC GATTCTTCCA
AGAGTTACAG AGTTTAATGG TGTTAAGCTA ACAGTAACTT ACCAAATAAC CGATGTAGCA
ACAGGTCGAT TATGTACCGT AGGAGAAACA AAACATTGTT TCTTAAATTC GGAGTATAAA
ATGTTTCGTT TAGCAAAAGA AAAGCCTGAA GTTTATCAGA TATTTAAGGG TTTGCTAGAA
TTAGGTGAAA AGAAAGCTTA A
|
|---|
| Protein sequence | MKEDIKAYQH KVQYYETDQM GIVHHSNYIR WFEEARTDML EQVGFTYQMM EECGVIIPVI
GVNCEYKSMV RFNDIVTILP RVTEFNGVKL TVTYQITDVA TGRLCTVGET KHCFLNSEYK
MFRLAKEKPE VYQIFKGLLE LGEKKA
|
|---|
| |