Gene Cphy_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2876 
Symbol 
ID5745149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3528731 
End bp3529741 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID641293976 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001559973 
Protein GI160881005 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000332017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA AAGTAGCAAT TAATGGTTTT GGACGTATCG GTCGTCTTGC ATTCAGACAG 
ATGTTTGGCG CAGAAGGTTA CGAAGTAGTA GCAATCAACG ATTTAACAAG CCCAGCTATG 
TTAGCTCATT TGTTAAAGTA TGATTCAGCT CAGGGAAGAT ATGACGGACA CACAGTAGAA 
GCAAAAGAGT CTTCTATCGT AGTTGACGGT AAGGAAATTA AAATTTATGC TGAAGCAGAT 
GCTTCTAAAC TTCCTTGGGG AACACTTGGA GTAGACGTTG TACTTGAATG TACAGGTTTC 
TATGTATCCA AGGCTAAATC TCAGGCACAC ATTGATGCTG GTGCTAAGAA GGTTGTTATC 
TCCGCTCCAG CTGGTGATGA TCTTCCTACT GTCGTTTTCA GCGTAAATGA AAATACATTA 
ACAGCTGAAG ATACAATCAT TTCTGCAGCT TCTTGTACAA CAAACTGTTT AGCTCCTATG 
GCAGATACAT TAAACAAGTT AGCTTCAATT GAAAAAGGTT TCATGACTAC AATCCACGCT 
TACACAGGTG ATCAGATGGT ACTTGATGGA CCACACAGAA AAGGCGATTT AAGAAGAGCT 
CGTGCAGCTG CTTGTAACAT CGTTCCTAAC AGCACTGGTG CTGCTAAGGC AATTGGTTTA 
GTTATTCCAG ATTTAGCTGG TAAATTAGAC GGTGCAGCTC AAAGAGTTCC AGTTCCAACA 
GGATCTACTA CTGAGTTAGT AGCAGTTGTT AACAAGAAAG TAACTAAGAA TGACATCAAT 
GCAGCTATGA AGGCAGCAGC TAGTGAATCT TTTGGTTACA CAGAGGAAGA GTTAGTATCT 
TCTGATGTCA TTGGAATTAG ATATGGTTCT TTATTCGATG CAACTCAGAC TAAGGTTACA 
GAGCTTCCTG ATGGAAAGAC TTTAGTTAAG ATCGTTTCTT GGTACGACAA TGAGAATTCT 
TACACAAGCC AGATGGTAAG AACAATCAAG TACTTCGCTG AATTAGCATA A
 
Protein sequence
MAVKVAINGF GRIGRLAFRQ MFGAEGYEVV AINDLTSPAM LAHLLKYDSA QGRYDGHTVE 
AKESSIVVDG KEIKIYAEAD ASKLPWGTLG VDVVLECTGF YVSKAKSQAH IDAGAKKVVI 
SAPAGDDLPT VVFSVNENTL TAEDTIISAA SCTTNCLAPM ADTLNKLASI EKGFMTTIHA 
YTGDQMVLDG PHRKGDLRRA RAAACNIVPN STGAAKAIGL VIPDLAGKLD GAAQRVPVPT 
GSTTELVAVV NKKVTKNDIN AAMKAAASES FGYTEEELVS SDVIGIRYGS LFDATQTKVT 
ELPDGKTLVK IVSWYDNENS YTSQMVRTIK YFAELA