Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2794 |
Symbol | |
ID | 5742109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3399814 |
End bp | 3401244 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293885 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001559893 |
Protein GI | 160880925 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000218049 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA AAACGGACAT ACCCTGGGAG GAATTTGACC CATCAAGTGA TGAGGAGTTT CAAAGAAACC TAGAGAAAGC TTTCTTTGAG GACGAACCGG AAGAACAGAT TGCGATTGAA TTTGCATCAA GTGATGAGAG TGAATATGAT AATTTTGAGC TTTATGAAAA AGCAGTACAT AGCATAGTCA ATCAAGAGTT GATGGATGCA GAGGAAGAGG TGAAGCAGTC TGACAAATTA AATTGCGAAG AGGAAGAGAT TATATCAGAG ATTACAAGAT CATTAGCGAA GCAAATTGAT CCAGAATTAG CAGTAGAAGA AACTATGGAA TCACCTTTAG AGGAAGAGAA ATCAAAGGAA GCCTTAAGAC GTAAGCGTTT GAAACAGATT GGATTACCGA TCTTAATTAC GCTTGGTGCA CTATTGCTAT CTGTATGCTT ATTATTTTTT ACAAAAGCAG GTCAAAGTTT ATTAATTCGC CTTGGAGCAA ATTTTGTAGC GAGCAAGGTT AAATATGATG ATGGAAGTGG ACATAAGGTG GAGACTATTC CGGAAATTAC GGATGTTCCA ACGAATGATG ATATAGAAAA GAATGAAGAA GATGTACAAT TAAGTGCAAA TAACGGAACA GTTAGACATG AAGATTATGC TGTTAACATT CTGCTTCTTG GAGAAGAGGC AATTTTTTCT GGAAATTCCA GGGGACGTAC TGATGTTATG ATGATAGCAA CACTAAATTC AAAAGAAAAA TCCATTAAAT TAACTTCGTT AATGAGGGAT TTGTATGTTC AAATACCAGG CTATCAAGAT GATAAGTTAA ACGCAGCGTA TGCAGTTGGA GGAATACCAA TGTTATTCAA TACGATTGAG TTAAACTTTG ATTTAAAATT AGACGGGTAT TGCCTCGTAG GGTTTGATGA CTTTGAAAAG ATTATTGATA AGTTAAATGG GATTGATATC ACACTAACCT CTGCGGAGGC AAATTGGTTA AATACAACGA ATTATATTTC GAATCCAAAC AATCGAACCG TTACAGCTGG TCTTAATCAT ATGAATGGAA ACCAGGCTCT TGGATTTTGT CGAATTAGAG ATGTTGCTAG TGGAACGAAT GAAAATAATG ATTTTGGTAG AACTTCAAGG CATCGTACTG TATTGGATGC TATTTTTGAA AAATATAAAT CATTAAATTA TTGGGATTTG GCCATGCTAA TGAATAGCTG TTTGCCAATG GTGACAACGG ATTTGGATGC AAAAGATCTT GAAACTTATA TACAGTTAGC AAAGGAAATT GGATTAACGA AGTTAGATCA ACTACGCATC CCGGTCAACA GTGCGTATGA AGATGCGTAT ATTAGTAAAA AAAGTGTTAT TATACCGAAT TTGCAAAAAA ATATAGAGGT ACTACACACA TTTATCTTTG GCTCTGAGTA A
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Protein sequence | MKRKTDIPWE EFDPSSDEEF QRNLEKAFFE DEPEEQIAIE FASSDESEYD NFELYEKAVH SIVNQELMDA EEEVKQSDKL NCEEEEIISE ITRSLAKQID PELAVEETME SPLEEEKSKE ALRRKRLKQI GLPILITLGA LLLSVCLLFF TKAGQSLLIR LGANFVASKV KYDDGSGHKV ETIPEITDVP TNDDIEKNEE DVQLSANNGT VRHEDYAVNI LLLGEEAIFS GNSRGRTDVM MIATLNSKEK SIKLTSLMRD LYVQIPGYQD DKLNAAYAVG GIPMLFNTIE LNFDLKLDGY CLVGFDDFEK IIDKLNGIDI TLTSAEANWL NTTNYISNPN NRTVTAGLNH MNGNQALGFC RIRDVASGTN ENNDFGRTSR HRTVLDAIFE KYKSLNYWDL AMLMNSCLPM VTTDLDAKDL ETYIQLAKEI GLTKLDQLRI PVNSAYEDAY ISKKSVIIPN LQKNIEVLHT FIFGSE
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