Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2790 |
Symbol | |
ID | 5742105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3395915 |
End bp | 3396586 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293881 |
Product | HAD family hydrolase |
Protein accession | YP_001559889 |
Protein GI | 160880921 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTAAAGA ATATAAATGC ATGTATTTTT GATTTAGATG GAACATTGGT AGACTCCATG TGGATGTGGG AGGCTATTGA TGTGGAATAC TTAAGTAGAT TTGGGATTGA GTTACCGGAA GGTCTACAAC GAGAAATTGA AGGAATGAGT TTTTCTGAAA CTGCAATCTA TTTTAAAGAA CGATTTCAGT TAGAACCTTC TGTAGAAGAA ATTAAGGACA CTTGGAACGA GATGGCATAT GAGAAATATT CAAAGGAAGT TCCATTAAAA CAAGGGGCAC TTAAATTTTT ACAATACTTA AAAGAAAATA ATATAAAAAC AGGAATTGCA ACAAGTAATT CTAAGGAACT TGCTAGTGCA GTACTAAAGG AACTTAATGT GGAACAGTAT TTTGATGCGA TTCATACTTC TTGTGAGGTT GCGAAGGGTA AACCATCGCC AGATATTTAT CTGTTTGTTG CAGAGAAACT TGCTGTAAAA CCAGAAAACT GTCTAGTTTT TGAAGATATT CCTCAAGGAA TATTAGCAGG AAAAAATGCT GGTATGAAAG TTTGTGCTGT TTGGGATGAG TTTTCTGTAT CGATTGAGGA AGAGAAGAAG AGATTAGCAG ATTATTTTAT AAAATCATTT GATGAGATAA TTCCAGCGGA TGTGAACGAT TTCATAGGGT AG
|
Protein sequence | MLKNINACIF DLDGTLVDSM WMWEAIDVEY LSRFGIELPE GLQREIEGMS FSETAIYFKE RFQLEPSVEE IKDTWNEMAY EKYSKEVPLK QGALKFLQYL KENNIKTGIA TSNSKELASA VLKELNVEQY FDAIHTSCEV AKGKPSPDIY LFVAEKLAVK PENCLVFEDI PQGILAGKNA GMKVCAVWDE FSVSIEEEKK RLADYFIKSF DEIIPADVND FIG
|
| |