Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2725 |
Symbol | nrdR |
ID | 5743018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3315035 |
End bp | 3315496 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293817 |
Product | transcriptional regulator NrdR |
Protein accession | YP_001559825 |
Protein GI | 160880857 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000561851 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGTC CATTTTGTGG AAAAGAAAAT ACAAGAGTAA TTGACTCAAG GCCAGCAGAT GATTGCAGTT CAATACGACG CAGAAGACAG TGTGATGAAT GTTCTAAACG TTTTACTACT TATGAAAAAG TAGAAACGAT ACCTTTGGTG GTAATTAAGA AGGATAATAA TCGTGAACCT TACGATCGTT CCAAAATTGA AGCAGGTGTG TTTCGTTCCT GCCATAAGCG CCCGATTTCC GTAGATCAGA TTAACGCACT CGTTGATGAA GTGGAAAACA CTATTTTTAA TTTGGAAGAA AAAGAAGTTC CAAGTAATAA AATCGGTGAA ATTGTGATGG ATAAGCTAAA GAGCTTAGAT GCTGTTGCTT ATGTTCGATT TGCTTCCGTT TATCGTGAAT TTAAGGATGT CAATACCTTT ATGAACGAAC TAAAGAAGAT ACTCGATCAT GAACATGTTT AA
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Protein sequence | MKCPFCGKEN TRVIDSRPAD DCSSIRRRRQ CDECSKRFTT YEKVETIPLV VIKKDNNREP YDRSKIEAGV FRSCHKRPIS VDQINALVDE VENTIFNLEE KEVPSNKIGE IVMDKLKSLD AVAYVRFASV YREFKDVNTF MNELKKILDH EHV
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