| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2721 |
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| Symbol | |
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| ID | 5743014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3307916 |
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| End bp | 3308683 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641293813 |
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| Product | transcriptional repressor CodY |
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| Protein accession | YP_001559821 |
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| Protein GI | 160880853 |
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| COG category | [K] Transcription |
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| COG ID | [COG4465] Pleiotropic transcriptional repressor |
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| TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000105427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGTAC AATTGTTGGA TAAAACCAGA AAAATTAATA AGTTATTGCA CAATAATAAC
TCACACAAGG TAGTATTTAA TGATATTTGT TCCGTACTTA GTGACATTTT AGAGTCCAAT
ATTCTTGTGA TTAGCAAGAA GGGAAAAGTA CTAGGAATTA AAAACAGAAC GGATATTACT
CCAATCAGTG AATTGATCAA AGATTCAGTA GGTGGCTACA TCGACGGTAT GTTGAATGAA
CGTCTACTCA ACATTTTATC AACAAAAGAA AATGTAAATT TAGCAACCTT AGGTTTTGAA
TTTGACGGTG TGAATGATTA TCAGGCAATT ATTACACCAA TCGACATCGC CGGTGAGAGA
CTTGGAACCT TGTTCTTATA TAAGAACAAA GACCAATATT CAATTGACGA CATAATTTTA
AGTGAGTATG GTACTACTGT AGTAGGGCTT GAGATGATGC GTTCCGTGAA TGAAGAAAAT
GCGGAAGAAA ACAGAAAGGT ACATATTGTA CGATCTGCGA TTAGCACACT TTCTTTCTCT
GAATTGGAAG CGATCACTCA TATATTTGAT GAACTAGAAG GAAATGAAGG TATCTTAGTT
GCCAGCAAGA TTGCAGACCG TGTAGGTATT ACAAGATCTG TTATTGTGAA TGCACTTAGA
AAATTTGAGA GTGCAGGCGT TATTGAATCC AGATCTTCTG GTATGAAGGG AACTTATATT
AAAGTTCTCA ATGATGTAGT TTTTGATGAA TTAAAAAAGA TGCAATAA
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| Protein sequence | MSVQLLDKTR KINKLLHNNN SHKVVFNDIC SVLSDILESN ILVISKKGKV LGIKNRTDIT
PISELIKDSV GGYIDGMLNE RLLNILSTKE NVNLATLGFE FDGVNDYQAI ITPIDIAGER
LGTLFLYKNK DQYSIDDIIL SEYGTTVVGL EMMRSVNEEN AEENRKVHIV RSAISTLSFS
ELEAITHIFD ELEGNEGILV ASKIADRVGI TRSVIVNALR KFESAGVIES RSSGMKGTYI
KVLNDVVFDE LKKMQ
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