| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2702 |
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| Symbol | |
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| ID | 5742995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3290160 |
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| End bp | 3291365 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641293794 |
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| Product | CheC, inhibitor of MCP methylation / FliN fusion protein |
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| Protein accession | YP_001559802 |
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| Protein GI | 160880834 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0537803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGTA TGTTATCTCA AGAAGAGATC AACGCTCTAT TAAATGGCAT GGGTACCGAA
AATGTAGAAA CCGCTGCTGA TCTCGAATCA CTCACGGATT CTGAAATAGA TGCATTAGGA
GAAATGTCTA ATATCAGTAT GGGGACAGCT GCAACAACAC TTTCTTCCCT GGTAAACCAA
AAAGTAACAA TTACAACTCC TAAAGTATGC TATGCTGAGT GGGAGGATTT ATTGTCAGCG
TATGATCGCC CATGTGTTTT TATTCAGATT TACTATAAGG ATGGCTTAGA TGGAAACAAC
ATCTTAGTCT TAAAAGAAAA GGATGTAAAA ATCATCACCG ACTTAATGAT GGGTGGAGAT
GGACTAAATA GTGAGGGTGA TTTAACAGAA CTGCACCTAA GTGCAATTAG TGAAGCAATG
AATCAGATGA TGGGTTCAGC TTCAACTTCT CTTTCTTCTA TGTTAGAGAA AAAAGTAGAC
ATCACTCCTC CAGTAGCAAG TATAGTAGAT ATCCCTGAGG TTATTGATGG GGGAGATATC
GCAGAGTTTT TAAAGAGTCG TTTTGTGAAA GTATCCTTCC GTATGGTGAT TGGTGATTTA
GTGGATAGTG AATTAATGCA ATTATATCCA TTTGATTTTG CAAGAGAATT ATATGAACAA
TTCATGAAAT ATACCGAGAC GGAAACGAAT GCAGCGGATG GATATTCTAA ACCAAAAAAA
GAAAAGACAG TAACACCTGA TCCAGTAGAA ACTTCTAACA ACAACTCATT TACTCAAGAT
ATAGGAAAGA ATATGAATAT GCAAACACCA CAAATGCAGC CACAGATGGC GCAGATGCAA
GGAATGTCAC TTCAAGGAAT GGCTATGCCT GGGATGAGTA TGCAACAAGT ACCTCAAGGT
ATGGTGCAAA ATGTGAATAT CGCACCTGCA CAATTTCAAC CTTTTGTTAA TACAGGTAGT
CCTCTGTTAC AGACAGAGAA TATTGATTTG TTATTGGATG TACCTTTGGA GGTTACAGTA
GAACTTGGTC GAACAAGTAA ATCTATTCGG GAAATACTTG ATTTTGCACC CGGAACTATT
GTAGAATTAA ATCGACTAGC CGGTGAACCA ATTGACGTTT TAGTAAATGG AAAGTATGTC
GCCAAGGGTG AAGTAGTTGT AATCGAAGAA GCATTTGGTA TTCGAGTTAC AGATATTATT
AAATAA
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| Protein sequence | MDGMLSQEEI NALLNGMGTE NVETAADLES LTDSEIDALG EMSNISMGTA ATTLSSLVNQ
KVTITTPKVC YAEWEDLLSA YDRPCVFIQI YYKDGLDGNN ILVLKEKDVK IITDLMMGGD
GLNSEGDLTE LHLSAISEAM NQMMGSASTS LSSMLEKKVD ITPPVASIVD IPEVIDGGDI
AEFLKSRFVK VSFRMVIGDL VDSELMQLYP FDFARELYEQ FMKYTETETN AADGYSKPKK
EKTVTPDPVE TSNNNSFTQD IGKNMNMQTP QMQPQMAQMQ GMSLQGMAMP GMSMQQVPQG
MVQNVNIAPA QFQPFVNTGS PLLQTENIDL LLDVPLEVTV ELGRTSKSIR EILDFAPGTI
VELNRLAGEP IDVLVNGKYV AKGEVVVIEE AFGIRVTDII K
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