| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2672 |
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| Symbol | |
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| ID | 5742839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3260384 |
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| End bp | 3261064 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293764 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001559772 |
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| Protein GI | 160880804 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000621779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTG AATTTATGAA GAGTCATATA CCGTTGTATG TAGAAGCAGC GAAAATGACT
ATGAAAATAT CACTAATTGG AATAGTGTTA GCGATTTTGA TTGGTCTAAT CTGTAGTCTC
ATAAAGACGT TGAGAATACC AATACTTAAG TCACTAGTGA ACATTTATAT TGAGATATCT
AGAAATACAC CATTGTTGAT TCAACTATTT TTTTTATATT TCGGACTTCC TAAAGTCGGT
ATTGTGCTTA GCTCAGAAAG TTGTGCAATT ATCGGTCTTG CATTTCAGGG GGGAAGTTAT
ATGGCAGAAG CATTTCGAAC AGGTATAGAA AATGTTGCAC CGATTCAAAC GGAATCTGGT
TTAAGTCTAG GCTTTACAAA GAGGCAAGTT TACTTTCATA TTGTACTTCC ACAAGCCATC
GCAACTTCTG TTCCAGTCTT CTGTGCCAAT ATCATATTTA TGATAAAGGA AACATCAGTA
TTCAGTGCAG TAGCTTTAGC AGACTTAATG TTTGTAGCAA AAGATTTGAT TGGAATTTAC
TATAAAACGG ACGAAGCACT CTTTTTATTG GTAACGGCTT ATCTGATTAT CTTATTGCCA
ATATCGTTAA TCTGTACCTG GATAGAAAGG AGGGTCCGTT ATGCAGGATT CGGGAATACA
AGTCCTATTT CAGGGAACTA A
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| Protein sequence | MDFEFMKSHI PLYVEAAKMT MKISLIGIVL AILIGLICSL IKTLRIPILK SLVNIYIEIS
RNTPLLIQLF FLYFGLPKVG IVLSSESCAI IGLAFQGGSY MAEAFRTGIE NVAPIQTESG
LSLGFTKRQV YFHIVLPQAI ATSVPVFCAN IIFMIKETSV FSAVALADLM FVAKDLIGIY
YKTDEALFLL VTAYLIILLP ISLICTWIER RVRYAGFGNT SPISGN
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