Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2632 |
Symbol | |
ID | 5742799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3218942 |
End bp | 3220573 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641293724 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001559732 |
Protein GI | 160880764 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0211688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATAG CAGATTTGGA AAATGGCAAC TATAGGAATC CATTACTTTA TGCAGATTAT TCTGATCCAG ATGCAATTAG AGTTGGTGAC GATTATTTTA TGGTTGCATC AAGTTTTTGC AATGCACCAG CTTTACCTTT ACTACATTCT AAGGATCTTG TGAACTGGAA AGTAGTGAAT TATGTCTTAG ATAAAATTCC AGAGTTTCGA TATAGAAATC CAATGCATGG ATGCGGTGTA TGGGCACCTT CTATCAGATA TCATGAAGGA ACATATTATG TGTGTTTCCC AATGCCAGAT GAGGGAATCT ACATGACTAC AACCAAAGAT CCATTTGGCA AGTGGAGTGA GCCTGTGAAT ATTAGACCGG GTGCAGGCTG GATTGATCCA TGTCCATTCT GGGATGAAGA TGGAAAAGCG TATCTTGTTG CAGGTGTAGC AAAGAGTCGT ATAGGATATA AAAGTGTCCT TCACATGGTG GAGATGCAAC CAGATGGTAT GGGACTTATC GGGGAAGATG TTAGAATCTT TGATGGCGAT ACCAACGGAA ATGTAACAAC AGAAGGTCCT AAGATGCATA AGAAGAATGG TTGGTATTAT GTCTTTGCAC CAGCGGGTGG CGTAAAGACA GGTTGGCAGT TAGTTCTTCG TTCTAAGAAT GTATTTGGCC CTTACGAACA CAAAGTTGTG ATGAAACAAG GGGATACTCT TGTTAACGGA CCTCATCAAG GTGCTTGGGT TGATACGGTT ACAGGTGAAG ACTGGTTTTT ACATTTTCAA GATGTGTATG CAGCAGGGAG AATCGTTCAT CTTCAACCAA TGCATTGGGA AAATGAATGG CCAATTATTG GTGTGAATAA AGAGGGAAAT GATTACGGCG AACCAGTAAT GGAATATAAG AAGCCTAACG TCGGTAAGAC AGAGGAAGAA CTTCAAAATA ATCCATTATA TCCGGTTTGT GAGCCAGATA CTACAGATGA ATTTGAAGGA GATAGCCTTG GCTTACAGTG GCAGTGGAAC GCGAATCCAG ACATTGATTG GTATGAATTA GGCAATTCAA AAATCAAATT GAATGCAGTA CCTTCTGTGC CACAACGTCC AATTAGCGAT TATCGTAATC TTCTTTTACA GAAGTGGCCA GCGCCTGAAT TTTCTTGTAT CACTAAGATG AGTTTTGCAG GATTACAGGA TGGAGATACT GCAGGAATTG TGTCCTTAGG GATGGAATAT AGTGCTATGG CAGTAAGCAA AAAGAATGGT TCTTACGCGA TCGAGAAGAT TACGGGAATT CAAAACTTTG ATTGTGATGT TTCCTATGCG GACCAGAATA AAGTAAGCAT TTCATTAACA GATAGTGATT TTAAAGATAG AGAAAAGACA GTATTCCTTA AATATGAAGT AAAGTGCGTA GGATATGTAG ATAATATGGA AATGGACATT CAAGTAAAGC ATGTTCCTCA GGAGACTATC ACAATGTCTT ATAGCCTTGA CGGTGAAGAG TTTAAGGAAG CATTTACGAT TAATGCTAAA GCAGGAAGAT GGGTAGGTGT TAAAAATGGT GTCTTCTGTA ACCATGATAA CACCATGAAT GGTGGAGGTT ATGTAGAAGT AGACTACGTT AGATATCAGT AA
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Protein sequence | MWIADLENGN YRNPLLYADY SDPDAIRVGD DYFMVASSFC NAPALPLLHS KDLVNWKVVN YVLDKIPEFR YRNPMHGCGV WAPSIRYHEG TYYVCFPMPD EGIYMTTTKD PFGKWSEPVN IRPGAGWIDP CPFWDEDGKA YLVAGVAKSR IGYKSVLHMV EMQPDGMGLI GEDVRIFDGD TNGNVTTEGP KMHKKNGWYY VFAPAGGVKT GWQLVLRSKN VFGPYEHKVV MKQGDTLVNG PHQGAWVDTV TGEDWFLHFQ DVYAAGRIVH LQPMHWENEW PIIGVNKEGN DYGEPVMEYK KPNVGKTEEE LQNNPLYPVC EPDTTDEFEG DSLGLQWQWN ANPDIDWYEL GNSKIKLNAV PSVPQRPISD YRNLLLQKWP APEFSCITKM SFAGLQDGDT AGIVSLGMEY SAMAVSKKNG SYAIEKITGI QNFDCDVSYA DQNKVSISLT DSDFKDREKT VFLKYEVKCV GYVDNMEMDI QVKHVPQETI TMSYSLDGEE FKEAFTINAK AGRWVGVKNG VFCNHDNTMN GGGYVEVDYV RYQ
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