Gene Cphy_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2546 
Symbol 
ID5741824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3115305 
End bp3115907 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content37% 
IMG OID641293636 
Productnicotinate (nicotinamide) nucleotide adenylyltransferase 
Protein accessionYP_001559646 
Protein GI160880678 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.063204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG TTGGTATTAT GGGTGGTACA TTTAATCCTA TCCACTTTGT TCATTTATTG 
CTTGCGGAAG CTGCTTATGA GCAGTATCAT TTGGAGGAAA TAATATTTCT TCCTTCCAAG
CGACCAGCGT ATAAACCATT ATCGGAGTTA ATTGAAGAAG AACATCGATT TCATATGATT
GAATTAGCGA TCAGTGACAA TCCACATTTT TCTGTGTCTG ATATGGAGTT CCATAGAGAA
GGAAATACGT ATACCGCAGA TACGTTACTT GAGTTAACGA AGAAGTTTCC TGATACAGAG
TTTTATTTTA TTATTGGTGG GGATTCTTTG TTTGAACTTG AGAAATGGTC AAGACCAGAA
ATCGTAATGG AAAAAGCGCA TATCGTTGCT GCTGGGCGGG ATGATAAAGA CGATGACCAA
ATGTTACAAA AGATAATGGA GCTGAATGAG AAATATAAGG CAAAGATTGA ACTATTACGA
GTGCCAATGA TGGAAGTATC ATCACGAATG CTGAGAGAAC GAGTAAAGGA AGGGCAGTCA
ATCCGATATT TTTTACCAGA AGCCGTGAGA AGTTATATTA TAAAACACGG GTTCTATCTC
TAA
 
Protein sequence
MRKVGIMGGT FNPIHFVHLL LAEAAYEQYH LEEIIFLPSK RPAYKPLSEL IEEEHRFHMI 
ELAISDNPHF SVSDMEFHRE GNTYTADTLL ELTKKFPDTE FYFIIGGDSL FELEKWSRPE
IVMEKAHIVA AGRDDKDDDQ MLQKIMELNE KYKAKIELLR VPMMEVSSRM LRERVKEGQS
IRYFLPEAVR SYIIKHGFYL