Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2538 |
Symbol | |
ID | 5742609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3107946 |
End bp | 3108959 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641293628 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001559638 |
Protein GI | 160880670 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000169868 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATCG TTATGAAGCC AAATGCAAAA AAGGAGTCAA TTGACAATAT ATTGAGACTG ATTAAAGAAA AAGGACTTGA TGTGCATATC TCGGCTGGGA AAGAAGTCAC CATTATTGGT GTCATTGGAG ATAAAAGTAA ATTATCTTGC TGTAATCTTG AGATTGCAGA AGATGTTGAT CATATTTTAC CTGTGACCGA GTCCTATAAG TTAGCAAATA AAAAATTTCA TCCGGAACCA ACTATTGTTA AAGTTGGTAA TACAACCATT GGTGGCGATG AACTTTGTGT TATGTCTGGT CCATGTGCAG TGGAAAGTGC ACATCAGGTT CTCGAAACAG CTATTGCAAT TAAAAAGTCA GGTGCAACTA TCTTAAGAGG TGGTGCATAC AAACCAAGAA CTTCCCCTTA CTCATTCCAA GGTCTTGAGG AGGAAGGCCT AAAGTATATG AAGGAAGCAA GAGAAGCTAC AGGTCTAGCA GTAGTTTGTG AGGTTACTAG TCTTGCAGCG ATTGAAGCCG CAGTAAAATA TGTTGATATG TTACAAATTG GAGCAAGAAA TATGCAAAAC TTTTATTTAC TAAAAGAAGC TGGTAAAACT GGTTTACCTG TTCTTTTAAA ACGTGGTCTT GCTGCAACAA TTGAAGATTG GTTAAACGCT TCTGAGTACA TTATATCGGA AGGTAATCCA AATGTAGTCT TATGTGAGCG AGGTATACGT ACCTTTGAAA CCGCAACAAG AAATACTTTA GATATTAGTG CGGTTCCTGT TATTAAGCAC AAGAGTCACC TGCCAATCAT TGTGGATCCA AGTCATGCAA CCGGAGTTAG ACGTTATATC GCTCCTCTTG CAAAATGTGC GATTGCTGCA GGTGCTGATG GATTAATGAT TGAAACACAT CCAGATCCAG CTACTGCACT TTCTGATGGG CCACAGTCAT TAACCTTTGA TCAATTCGAT GAACTTTGCA ATGAATTACG TCCATACGCT AAGTTGGCAG GAAAACGCTT CTAG
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Protein sequence | MIIVMKPNAK KESIDNILRL IKEKGLDVHI SAGKEVTIIG VIGDKSKLSC CNLEIAEDVD HILPVTESYK LANKKFHPEP TIVKVGNTTI GGDELCVMSG PCAVESAHQV LETAIAIKKS GATILRGGAY KPRTSPYSFQ GLEEEGLKYM KEAREATGLA VVCEVTSLAA IEAAVKYVDM LQIGARNMQN FYLLKEAGKT GLPVLLKRGL AATIEDWLNA SEYIISEGNP NVVLCERGIR TFETATRNTL DISAVPVIKH KSHLPIIVDP SHATGVRRYI APLAKCAIAA GADGLMIETH PDPATALSDG PQSLTFDQFD ELCNELRPYA KLAGKRF
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