| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2494 |
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| Symbol | |
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| ID | 5742565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3062079 |
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| End bp | 3063602 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641293584 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001559594 |
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| Protein GI | 160880626 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGT TTCATGTAAA CGAAATTGCT ACAATTACTG GTGGCACTAT AATAAAGGGA
AATAATGATA GAACAATTTT TAAAATAAGC ACTAACTCAA AAGTAGGAGA TAGTGATACA
CTCTTTGTAC CCATTGTTGG TGAAAGAGTA GATGCACATG ATTTCATTGC AGATGCTTAT
AGGCAAGGTA TCAGAGTAAC GCTAACAAGC AAAGATGAAA TAGCAGAAGG TACCGAAGAT
ATGGTTTATA TTAAAGTAAA TCATACAGTA GAAGCATTAC AACGTCTAGG AGAATATCAT
CGTGACCATA GTAATGTTCC AATCATTGGG ATAACCGGAA GTGTTGGAAA AACTACGACA
AAGGAAATGA TAGCAGCAGC GTTTAGTACC AGAAGTAATG TTTTAAAAAC GATTGGGAAT
ATGAATAGTC AAGTTGGTTT GCCACAAATG ATGCTGATGC TTGAAGATAC TCATGAAGTT
GGTATTATTG AGATGGGTAT GAGTGAATTT GGTGAAATGG AGCGTATCGC TAAAGTAGCA
AAGCCTAAAA TGGCAGTTGT TACAAACATC GGTGTTTCGC ATATCGGACA GTTAAAGACA
CAGGAAAATA TTCGGAAAGA AAAATTAAAC ATTGTGAATT ACTTTACCGA GGATTCCATT
CTTCTATTAA ATGGTGATGA TCAGCTATTA TTGGAAATCT ACGATGAATA TAGAAAAGAT
AATAGCTCTG TCAAAGAAAA AACACAAAAT AATGGTAGTG TTGATTTATC AGAAATGACA
CGAAGAAGCT TAAATAAGGC ATCTGTTTAT ACCTTTGGAA CAAACCCTGA TTGTACCATT
TATGCTGACA ACATAAAAAC AGATGGTGAG TCAACAACAT TTACTTTTCA TTACAAAAAT
GGTACGAAAG AAGAACTTGT AGATGACATC ACTTTATCAG TTCTTGGTAA GCATAATATA
TTAAACGCTC TTGCTGCTAT TTTCTTTGCA ATTCAATTAG GAATAGATCC TTTGGCTGCA
AAAGAAGGAT TAAAAGAGTA TAAACCAATC GCAATGCGTG GAGAGATAGA AAAAGTCAAT
GGAATCACAA TAATTGACGA TACTTACAAT GCTAGTCCTG ACTCCATGAA GGGAGCAATT
CATGTTATAA TGGATATGCC AAAAGAACAT AAGAAGTTCA TAGTATTTGC GGATATTTTA
GAACTTGGAG ACATCTCTAA AAAATGTCAT TATGAGGTGG GAGAATATTT AGCAAAGCAA
TGTAAGATAG AAAAAGCTTG TGGGAAAGAA TCAACATTTA TCGATGAAGT AATAACGATT
GGTGAGGAAG CAAAGTATAT CCTCGATGGA GTAAGGGAAA ACGGGGAAGA CATAAACACA
AAGAGTTTTA TGGAGCGAGA GGAAGCTTTT AAATATATTA AAACTAATTT GACAAAAAGG
GACGTTATAC TTTTAAAAGG TTCCCGAGGT ATGAAGCTTG ATTTAATCGT TGAGAGATTA
AAGGAAGAGT TAGTTAAGTG TTAA
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| Protein sequence | MATFHVNEIA TITGGTIIKG NNDRTIFKIS TNSKVGDSDT LFVPIVGERV DAHDFIADAY
RQGIRVTLTS KDEIAEGTED MVYIKVNHTV EALQRLGEYH RDHSNVPIIG ITGSVGKTTT
KEMIAAAFST RSNVLKTIGN MNSQVGLPQM MLMLEDTHEV GIIEMGMSEF GEMERIAKVA
KPKMAVVTNI GVSHIGQLKT QENIRKEKLN IVNYFTEDSI LLLNGDDQLL LEIYDEYRKD
NSSVKEKTQN NGSVDLSEMT RRSLNKASVY TFGTNPDCTI YADNIKTDGE STTFTFHYKN
GTKEELVDDI TLSVLGKHNI LNALAAIFFA IQLGIDPLAA KEGLKEYKPI AMRGEIEKVN
GITIIDDTYN ASPDSMKGAI HVIMDMPKEH KKFIVFADIL ELGDISKKCH YEVGEYLAKQ
CKIEKACGKE STFIDEVITI GEEAKYILDG VRENGEDINT KSFMEREEAF KYIKTNLTKR
DVILLKGSRG MKLDLIVERL KEELVKC
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