Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2444 |
Symbol | |
ID | 5742515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3001116 |
End bp | 3001823 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293534 |
Product | ribonuclease III |
Protein accession | YP_001559544 |
Protein GI | 160880576 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.517921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGAAT TATCAACAAA GAAGTTGTTA GCTGAATTTG AGCAAAAGAT TGATTATGCG TTCACAGAAC CAGGTCTATT AAGACAAGCG TTAACACATA GTTCATTTGC AAATGAGAAG AGACTCAGTA AGTTAGCGAA TAACGAACGT CTAGAGTTTT TAGGGGATGC TGTGTTAGAA TTAACAACAA GTGAATGGTT ATTTGAAAAA CACCCTAAGA TGCCAGAAGG AGATCTCACG AAATTACGCG CGAGCATGGT ATGTGAACAA ACACTTGCTT TATGTGCAAG AGAACTTCAT CTTGGGAATT ATGTATTTCT TGGAAAAGGA GAAGACACCA CAGGAGGTAG AGACAGGGAT TCTATTCTTT CTGATGCCTT AGAGTCAATT ATTGGTGCTA TCTATTTGGA TGGTGGTTTT GCTAATGCAA AAGAGTTTAT TAGTAATTAT ATATTATCTG ATATCGAACA TAAGAAACTC TTTTATGATA GCAAGACTAT CTTACAAGAA ATTGTTCAAA GTGAATATAA GAAACATCTA AGTTATGAGT TACTTCAGGA GACCGGACCG GATCACAATA AGAAATTTAC GGTCGTGGCC AAGATGGATG AAGAAAGTTT AGAAATCGGA ACCGGACGTA CAAAAAAAGC CGCAGAACAA GAAGCAGCAT ATCGCTCTAT TCTACAATTG CGAAAATTAC TAAAATAA
|
Protein sequence | MAELSTKKLL AEFEQKIDYA FTEPGLLRQA LTHSSFANEK RLSKLANNER LEFLGDAVLE LTTSEWLFEK HPKMPEGDLT KLRASMVCEQ TLALCARELH LGNYVFLGKG EDTTGGRDRD SILSDALESI IGAIYLDGGF ANAKEFISNY ILSDIEHKKL FYDSKTILQE IVQSEYKKHL SYELLQETGP DHNKKFTVVA KMDEESLEIG TGRTKKAAEQ EAAYRSILQL RKLLK
|
| |