Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2402 |
Symbol | |
ID | 5742472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2957572 |
End bp | 2958216 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293492 |
Product | signal peptidase I |
Protein accession | YP_001559502 |
Protein GI | 160880534 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4959] Type IV secretory pathway, protease TraF |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000528092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTATTA GTATGATGAA ATATGATTTT GATAGGGATA TCAAACGCAA AAAGCGTAAA AAATTATATA TAAGAATCAT AATTTGGATG GTTGAGATAG TAGCAGTGAT TGCTCTTGCA TATGCAATCA TTAATGTTGC ACTTGAGAAG ACAACGATGC TTGGGGAATC AATGGAAATT ACCTTGCAGG ATGAGGATAA GATTGTTATA AATAAATTAG CATATAAGTT TCGTGATCCA AAGAGATACG ATATTATTGT ATTTAAGCAA AGTGGCAATG AGCATAGTTA CTATAATATA AAACGTGTGA TTGGTTTGCC AGGAGAGCGA GTAAAGATTT TAGATGGCGT AGTTTATGTG AATGGTGAAG CTTTAGAGGA ACCGATGGTA GTTGATCCTA TAAGAATACC AGGCCTTGCA GACGAAGAGT TTACCTTAGA TGAGGATGAA TTTTTTGTAC TTGGTGATAA TCGAAATAAT AGTGAAGACA GCCGTTTCGC GAATATCGGT AATGTAGTAA AAGATGATAT TATTGGTAAG GCATGGATTC GGTTAAATCC ATTCGGCATT GTTAATAAGA TAAATATGTA CTCAAAATCT GTTGAGGAGA ATGTTGAGGG AGAAGGCAAA ACTTCAGGGG AGTAG
|
Protein sequence | MVISMMKYDF DRDIKRKKRK KLYIRIIIWM VEIVAVIALA YAIINVALEK TTMLGESMEI TLQDEDKIVI NKLAYKFRDP KRYDIIVFKQ SGNEHSYYNI KRVIGLPGER VKILDGVVYV NGEALEEPMV VDPIRIPGLA DEEFTLDEDE FFVLGDNRNN SEDSRFANIG NVVKDDIIGK AWIRLNPFGI VNKINMYSKS VEENVEGEGK TSGE
|
| |