| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2349 |
|---|
| Symbol | |
|---|
| ID | 5745408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2899812 |
|---|
| End bp | 2901263 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641293439 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_001559449 |
|---|
| Protein GI | 160880481 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAAG CAGGAATACT ATTACCTTTA TCATCCTTAC CGTCAAATCA TGGAATTGGT
GATATGGGGT CATATAGTTT TGAATTGATT GATTTATTAA AAGCAGGTGG TTTTCGCATA
TGGCAGATAT TGCCCATTAA TCCTTTAGGA TATGGAAATT CACCTTACCA GCCATACTCC
TCATTTGCAG GTGATGAGAT TTATATAAGT CTTGATGAAT TATATAAGGA TGGTTTATTC
ACAAATAAAC CGCCAGAGTT TCAAAAATAT AGTAAATCTG TTGATTATGA AAATGTAAGA
AAATTTAAAG AAATTTATTT AAAAGAAGCT TTTCTTAAGT TTACAGAGGA TACTGATTAT
AAGGAGTTTA TAAAACAGGA ATGGGTATAC CTTTATGCCG TATTTCTTAC ACTAAAAAAG
AAAAATGAGT TAAGGTGTTG GAATGAATGG GATAAAGAAC AGAAGGAATG GATAAAGTCA
AGAGAGTTTG ATGTATCTTT ATATGAAGAA GAGATACGGT ATGAAATGTT TGTTCAGTAT
ATCTTCTACA AACAATGGAT GAAGATAAGG ACTTATGCGA ATCAAAACGG CATTCGTATC
ATGGGCGATA TACCATTTTA TGTGGGAATA GACTCTTTAG ATGTCTGGGC AAACCAAGAG
TGCTTTTTAC TTGGGGCAGA TGGAAAACCG ACATTTGTTG CAGGAGTGCC TCCAGATTAC
TTTAGTGTTA CTGGTCAAAG ATGGGGAAAT CCAATCTATG ACTGGGATTA TTTAAAAAAG
CAAAATTATC AGTTTTGGTT AGACCGAATT GCTTATAGCA GTAAACTGTT TGATATTATC
CGTATTGATC ATTTCCGTGC TTTTGATACT TATTGGAAAA TACCTGCCAC CTGCGAAACT
GCAGTGGAGG GTGAATGGCT AGAAGCGCCT GGCTATGATG TGTTTGACTT AATTGTTAAG
AAGTATCCAG AAGTTGAAAT TGTTGCTGAA GACTTAGGGG ATTTAAGGGA AGAAGTTCAT
GTACTTAAAA ACCATTATGG ATTAAAGGGA ATGAAAATCG TTCAATTTAC ATTTGATCCA
AATGAAAATA ACAATAATTT TGAAGATATT GAAAATATGG TTATTTATAC GGGAAGTCAT
GACAATCAAA CAATAAGTGG CTGGTATTTA TCTCAGGATG AAAAGACACA GAATGAGATT
AGGAAATCTC TAATGAAGTC AGGCTATGAC GATACGATTA TTTCCAAACG ATTTGTAAGA
CTTACTTTAG ATAGTATTGC AGAGATGGCA ATCCTACCGT TACAGGATTT AATTAATTTA
GGTGATGAAG CTAGAATTAA TACTCCTGGT ACACTTGGCT CACCTAATTG GGAATGGAAA
TTAGATAGCT TTAATGAATT TAAAGAAGAA ATCGGTAATT TAAAGGAATG CATTATTGCT
AGCAGACGGT AA
|
|---|
| Protein sequence | MREAGILLPL SSLPSNHGIG DMGSYSFELI DLLKAGGFRI WQILPINPLG YGNSPYQPYS
SFAGDEIYIS LDELYKDGLF TNKPPEFQKY SKSVDYENVR KFKEIYLKEA FLKFTEDTDY
KEFIKQEWVY LYAVFLTLKK KNELRCWNEW DKEQKEWIKS REFDVSLYEE EIRYEMFVQY
IFYKQWMKIR TYANQNGIRI MGDIPFYVGI DSLDVWANQE CFLLGADGKP TFVAGVPPDY
FSVTGQRWGN PIYDWDYLKK QNYQFWLDRI AYSSKLFDII RIDHFRAFDT YWKIPATCET
AVEGEWLEAP GYDVFDLIVK KYPEVEIVAE DLGDLREEVH VLKNHYGLKG MKIVQFTFDP
NENNNNFEDI ENMVIYTGSH DNQTISGWYL SQDEKTQNEI RKSLMKSGYD DTIISKRFVR
LTLDSIAEMA ILPLQDLINL GDEARINTPG TLGSPNWEWK LDSFNEFKEE IGNLKECIIA
SRR
|
|---|
| |