| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2342 |
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| Symbol | |
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| ID | 5745401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2887378 |
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| End bp | 2888994 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641293432 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001559442 |
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| Protein GI | 160880474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAAAAA AATGGTGGCA CAGTTCAGTT GTGTATCAGA TATATCCAAG AAGTTTTAAT
GACAGCAATG GAGATGGAAT AGGTGATCTA AAAGGTATTA TTGAAAAATT AGATTATCTT
AAAAATTTGG GGATTGATGT AATTTGGTTA AGTCCTGTTT TTAAGTCACC AAATGATGAT
AACGGCTATG ATATCAGCGA TTATGAAGAT ATTATGGACG AATTTGGTAC TTTGGAAGAT
ATGGAACTTC TTTTAAAGGA AGCGAACAAT AGAGGTATTA AAATTCTTAT GGACTTAGTT
GCCAACCATA CTTCTGATGA GCATAAATGG TTTATTGAGT CTAGGAAATC AAAAGATAAT
GCTTATAGGG ACTATTATAT ATGGAGAGAT CCAGTAGATG GTCATGAACC GAATGATTTA
GGTTCTACTT TCTCCGGAAG TGCTTGGGAA TGGGATGAAG CGACAGGGCA ATATTATTTG
CATTTATTTA GCAAGAAGCA GCCAGATTTG AACTGGGAAA ATCCTATCGT CAGAGAAGAA
GTCTGGAAGT CTATGAATTT TTGGATTGAT AAGGGTATCG GTGGTTTTAG AATGGATGTT
ATTGAGCTTC TTGGTAAGAT TCCAGATGAA AAAATTATTA GTAACGGACC TATGCTCCAT
GAATATATTC GAGAGATGAA CAGGAATAGC TTTGGGGATA AGGATTTATT AACGGTAGGT
GAATGCTGGG GTGCAACTCC TGAAATAGCT AAAATGTATT CTAATCCTGA CGGTAGTGAA
TTAAGTATGG TATTTCAGTT TGAGCATATT GGGCTGGATC AGATACCGGG AAAAGATAAA
TGGGATTTAC AACCTCTGAA CTTAATTGAC CTTAAGAATG TATTTCATAA ATGGCAAACC
TGTTTTCATG ACGATGGATG GAATAGTTTG TTCTGGAATA ACCATGACAC ACCAAGAATT
GTATCCAGAT GGGGAAATGA TAAGGTATAC AAGATTGAAA GTGCTAAGAT GTTAGCAACA
CTTCTGCATG GGCTTAAGGG TACCCCTTAT ATATATCAGG GTGAGGAATT AGGAATGGCC
AATATTAAGT TTAAAGATAT CAATCAATAT AAAGATATAG AAACTCTTAA TATGTATAAA
GACCGCTTAA ATAAAGGTTA TAAGCACGAA GATATTATGG AATCCATATA TGCTAAGGGC
AGAGATAATG CCAGAACCCC TATGCAGTGG AGTGATGAGA TAGATGGCGG ATTTACAACC
GGTACACCTT GGATCGAGGT AAATCCAAAC TTTACAGAGA TAAATGCAAA AGAACAGGTA
AGTAATCCAA ACTCCATTTA TAATTATTAT AAAAAATTGA TAGAGATAAG AAAGAACAAT
GAAGTAATTG TATATGGTGA TTTTGAAATG TTACTTCCGG AAGACAAAAA TATATTTGCA
TATGTTAGAA CCTTAAAAGA TTCCAAAATA GTAGTAGTAT GCAACTTCTA TGAAAATGAA
GTGGAATATA ACATACCAAA GGAATACGAA GAAAAGAAAG AAGTTCTTAT TTCTAATTAT
GGTTTAAGTT TAACGGGCAG ATTAAGACCT TTTGAAGCGA TTATGTATAG GGTATAG
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| Protein sequence | MVKKWWHSSV VYQIYPRSFN DSNGDGIGDL KGIIEKLDYL KNLGIDVIWL SPVFKSPNDD
NGYDISDYED IMDEFGTLED MELLLKEANN RGIKILMDLV ANHTSDEHKW FIESRKSKDN
AYRDYYIWRD PVDGHEPNDL GSTFSGSAWE WDEATGQYYL HLFSKKQPDL NWENPIVREE
VWKSMNFWID KGIGGFRMDV IELLGKIPDE KIISNGPMLH EYIREMNRNS FGDKDLLTVG
ECWGATPEIA KMYSNPDGSE LSMVFQFEHI GLDQIPGKDK WDLQPLNLID LKNVFHKWQT
CFHDDGWNSL FWNNHDTPRI VSRWGNDKVY KIESAKMLAT LLHGLKGTPY IYQGEELGMA
NIKFKDINQY KDIETLNMYK DRLNKGYKHE DIMESIYAKG RDNARTPMQW SDEIDGGFTT
GTPWIEVNPN FTEINAKEQV SNPNSIYNYY KKLIEIRKNN EVIVYGDFEM LLPEDKNIFA
YVRTLKDSKI VVVCNFYENE VEYNIPKEYE EKKEVLISNY GLSLTGRLRP FEAIMYRV
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