Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2253 |
Symbol | |
ID | 5745313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2774354 |
End bp | 2775952 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293345 |
Product | two component AraC family transcriptional regulator |
Protein accession | YP_001559355 |
Protein GI | 160880387 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACTA TAGTAGTAGC TGATGATGAA GAGGAATTAC GCAGTGCTAT CATTCGTAAA ATGGACTGGA ATAGCATCGG GTTTCAGGTA GTAGGTGAGG CGAGTAATGG AATAGAAGCC TTAGAGATGG TGGAAAAGGA AGAGCCTGAT TTGTTATTAA CGGATATTCG TATGCCGTTT TTATCAGGAA TAGAACTAGC AAGACAAGTA AGAGAAATAA GGCCTACGAC ACAGATTGCT TTTTTAAGTG GTTATGATGA TTTTTCATAC GCACAACAAG CGATACAATA CAATGTAATC AGCTATCTGT TAAAACCAAT TAGTATGACG GATTTAACAC AAAAATTATT AGAAATAAAG GATAAGCTGG ATCATCTATT TGAGGAATTT CATATTCTTA GTAAAGTGCT AAATGACAGT CAGAGTTTTG TTGTTCCGTT ACTTCTCGAC GAGTGTGGGG AACGTGATAA TTTGGCTAGA GAAGAATTGT TATTGGAGCA GGCAGTCGCA TGTGGACTGA TACAAAATAG TTCAACATCA TATAATTATA CTGTGATGGC AGTGAGATTA CGAGATCACC AAGGTGAGAA TAGGACCGAT ATGGAATTGG TTCATTCCAT TGATATCATT TTAAAAAAAT ACATAAAACA TTATAGCTTT TATACCGAGG GAAGGGTAAT TAGCTTGTTA ATCGGTACGA AACCAACTTT CGATAAATAT CTCCATATTA TTGTAGGCGA AATTATGCAA AGTATAGAGA GAATCCTTGG TATGTATTGT GATATCGGAA TTAGTCGATT GGTCGATAAG CTAGGATACT GCCATGAGGC ATATCGAGAG GCTATGAATG CTTTAAGTTA CAGTTTATCT GGTAGAAGCA ACGTTCATTA CATTTCGGAT GAGGAACGTG CTGATTTTGA TTTGTCGAAG GTTCCGGATA TTATATTGGA AATCGAAAAT TTGCTTCGTG GTGGAAGCAA GAGGGAGTTA GCGAGTTATT TAGACCGTAT GTTTTATAGT TTCCTTAACA CAAAAAACTA TCAGATTAAG ATGAAGATAG TTTTAATTCA GGTATTTGCG GCAGTCTGTA AAACCGTATA CGCTGTTACG GATAGTGATG ATAGAAAAGA AGCTTGGGAT GATACGATAG TGGACCAGAT GAATTTCTTT GAAGGTACCT TTCAGGAAAC AAAGGAGAGA TTTATAGACT TATGCCAAAA GGCAAGTGAA CTGGTAAGTA CGGGAAGAAA AAAGAGCAGT GAAATTTTAT GTGACCAGGT TTTATATATT ATTGAAAAAG AATATGCGAA TCCTGAGATG TCCTTGGTAA GTGTCAGCAA TCAAATCAAT GTGAGTCCAA ATTATTTGAG TGCGTTAATG AAAAAGCAGA CCGGACAAAG TTTTGTAGAT TTACTTACCA AGAAGAGGAT AGAAACTGCG AAAGAGCTAC TATTATATAC CCCAATGAAA ATTCGAGAGA TAACGGAAAA GTGTGGTTAC AATGACCAGC ATTATTTTAG TTATTGTTTT AAAAAATTCT ATGGTTTATC ACCCAATGTA CTTCGTCAAC AAAACGCAGT GGCTGGGGAA ATAGTTTAG
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Protein sequence | MYTIVVADDE EELRSAIIRK MDWNSIGFQV VGEASNGIEA LEMVEKEEPD LLLTDIRMPF LSGIELARQV REIRPTTQIA FLSGYDDFSY AQQAIQYNVI SYLLKPISMT DLTQKLLEIK DKLDHLFEEF HILSKVLNDS QSFVVPLLLD ECGERDNLAR EELLLEQAVA CGLIQNSSTS YNYTVMAVRL RDHQGENRTD MELVHSIDII LKKYIKHYSF YTEGRVISLL IGTKPTFDKY LHIIVGEIMQ SIERILGMYC DIGISRLVDK LGYCHEAYRE AMNALSYSLS GRSNVHYISD EERADFDLSK VPDIILEIEN LLRGGSKREL ASYLDRMFYS FLNTKNYQIK MKIVLIQVFA AVCKTVYAVT DSDDRKEAWD DTIVDQMNFF EGTFQETKER FIDLCQKASE LVSTGRKKSS EILCDQVLYI IEKEYANPEM SLVSVSNQIN VSPNYLSALM KKQTGQSFVD LLTKKRIETA KELLLYTPMK IREITEKCGY NDQHYFSYCF KKFYGLSPNV LRQQNAVAGE IV
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