Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2243 |
Symbol | |
ID | 5745303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2763191 |
End bp | 2764294 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293337 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001559347 |
Protein GI | 160880379 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TTTGGGCACT CATGCTAGTA GCAGTTATGG TGTTTAGCCT TTCGGCTTGT GGAGGAAGCA AAGGCACATC AGGTAAAGGA TCTTCTTTAA ATGTAGGTGT ATTTTACTAT ACATATAGTG ATACCTATAT TTCAAGTGTT CGTACTGCAC TTGATAAATC ACTAACAGAT GCAGGTATCA AATATCAGAA TTATGATGGA AATAGCAATC AGACTACTCA GAATGAGCAG ATTGATACCG CAATTAGTCA GGGAACAAAT TTATTGATTG TAAATATTGT AACATCTGGT TCTATGGATG CATCTAATTC AATCGTAGAG AAAGCAAAGG CTGCTAAAAT TCCAGTAATT TTCTTTAACC GTGCAGTAGA ATCTGATGAA GATGAAGGCA AAGTGTTAGG AAGCTATGAT AAATGCGCAT TCGTTGGAAC AGATGCACCG GAAGCTGGAC ATATGCAAGG GCAAATGGTA GGCGATTATG TAGTAAAGAA CTTTGATGCT ATTGACTTAA ACGGTGATGG CAAAATCAGT TATGCAATGT TCATGGGTCA GTTAGGTAAC GTAGAAGCTA TCTATCGTAC TCAGTTTGGT GTAGAAGATG CGGATAAAGT AATCACAGCA GCTGGAAAGC CTGCATTACA ATACTTTGAT TCATCAAACT CTGATAAATA TCAGGTTGAC AAAGATGGTA CTTGGTCTGC ATCAGCAGCA AATGACTATA TGACAACAAA CCTTGCTCAG TACAGTGAAG CTACAAATAA TATGATTGAG TTAATTATCT GTAATAACGA TGGTATGGCA GAAGGCGTTA TCTCCGCACT CAATGACAAA GGATATAACT TAGGAACTGC TGATTGTAAG ACTATTCCAG TATTCGGTGT AGATGCAACA GATGCAGCAA AACAGTTAAT CGCAGATGGT AAGATGACTG GTACGATTAA ACAGGATGCT GTAGGTATGG CAGATGGAAT CGCTTATCTT GCTAAGAATA TTCAGAATGG TAAAGATTTA ATGGCTGATA CAAGTAACTT TAACATTTCT CCTAAAGTAA GCAACAAGAT TTACATCCCA TATGCTGCTT ATATCGGTGA ATAA
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Protein sequence | MKKFWALMLV AVMVFSLSAC GGSKGTSGKG SSLNVGVFYY TYSDTYISSV RTALDKSLTD AGIKYQNYDG NSNQTTQNEQ IDTAISQGTN LLIVNIVTSG SMDASNSIVE KAKAAKIPVI FFNRAVESDE DEGKVLGSYD KCAFVGTDAP EAGHMQGQMV GDYVVKNFDA IDLNGDGKIS YAMFMGQLGN VEAIYRTQFG VEDADKVITA AGKPALQYFD SSNSDKYQVD KDGTWSASAA NDYMTTNLAQ YSEATNNMIE LIICNNDGMA EGVISALNDK GYNLGTADCK TIPVFGVDAT DAAKQLIADG KMTGTIKQDA VGMADGIAYL AKNIQNGKDL MADTSNFNIS PKVSNKIYIP YAAYIGE
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