Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2195 |
Symbol | |
ID | 5744506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2710892 |
End bp | 2711944 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293290 |
Product | integrase family protein |
Protein accession | YP_001559300 |
Protein GI | 160880332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATG AAACTTATCA TCAGAAGAAA GCGAAAGAAA ACATCCTTAA ATTAAGAGAA CTCTTAACTC AGCTACCTCC TTGGTTAAAA GATTTTTTTC GTGGAATAGA GCAATCTACA GAACCACGGA CCAGAATCGC CTATGCCATT GATTTACAAA CATTTTTAGA ATTCTTACAA TCACAAAATC CTTCCTTTGA AGGTAAACCT ATTAAAGAAA TTCCACGAGA TGTTTTAACT TCATTAAAAT CTACGGATAT CGAAGAATAC TTAGAACATC TAAAATATTA TAAAAACGCA GAAGGAAAAG AATTTATCAA CAATGATCGT GCCATGAAAC GCAAACTCTC TACCCTGCGT ACTATGTACA GTTATTATCA TAAAAATAAA ATCATAGATG AGAATCCGGT ACTTCAAGTT GATATGCCAA AAATTCATGA AAAAGCTATC GTTCGTCTTG AAATCAATGA AGTAGCTGAA TTATTAGATG TTGTTGAAAC AGGAAGTAAA CTAACTGATA CTCAAAAAGT ATTTCATGAA AAGAATAAAG TCCGTGACCT AGCCTTAATG ACCTTACTAT TAGGAACTGG TATCCGAGTA TCTGAGTGTG TTGGCCTTGA TTTAACAGAC GTTGATTTTG ATAATGACCG CATCAAAGTA GTTAGAAAAG GTGGTTATGA ATCCTATGTT TACTTTGGAG AAGAAGTTCG AGATGCACTA CTCTCTTACA TGGACGAACG AGACCAGATT ATTGCTGTAG ATGGTCATGA AAATGCACTC TTTCTTTCTT CAAGAAGAAG CCGCATCAGC GTTCGTAATG TCGAAGTTCT AGTAAAGAAA TATGCACAAA CAGTAACAAC CCTTAAGAAA ATCACACCAC ATAAGCTAAG AAGTACTTAT GGTACTTCTC TATATCAAGA AACAGGAGAT ATTTATCTAG TAGCTGACGT TTTAGGGCAT CGCGATGTTA ATACTACGAA GAAGCACTAT GCTGCTATTG AGGATGAGAG AAGAAGAAGT GCTAGGGATA AGGTGAAGTT GAGGGAAAAA TAA
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Protein sequence | MENETYHQKK AKENILKLRE LLTQLPPWLK DFFRGIEQST EPRTRIAYAI DLQTFLEFLQ SQNPSFEGKP IKEIPRDVLT SLKSTDIEEY LEHLKYYKNA EGKEFINNDR AMKRKLSTLR TMYSYYHKNK IIDENPVLQV DMPKIHEKAI VRLEINEVAE LLDVVETGSK LTDTQKVFHE KNKVRDLALM TLLLGTGIRV SECVGLDLTD VDFDNDRIKV VRKGGYESYV YFGEEVRDAL LSYMDERDQI IAVDGHENAL FLSSRRSRIS VRNVEVLVKK YAQTVTTLKK ITPHKLRSTY GTSLYQETGD IYLVADVLGH RDVNTTKKHY AAIEDERRRS ARDKVKLREK
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