Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1984 |
Symbol | |
ID | 5744664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2450413 |
End bp | 2451300 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641293081 |
Product | ABC transporter related |
Protein accession | YP_001559091 |
Protein GI | 160880123 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAC TTGAAATAAA AAAATTGACA AAAAGTTATG GTAAGAAAAA CGCAAATAGC AACATAACAC TTACCTTGGA AAATGGTGTA TATGGGCTTT TAGGCCCGAA TGGAGCTGGT AAGACTACAC TCATGAAACA AATAGCAACA TTGATTAAGC CTACATCTGG AGAGATCATC TACAATGATA ACAACATTTA TAGTATGGAA GACAACTATA GAGGGGTTAT AGGTTATTTA CCACAAGAGT TTGGTGCTTA TAAAAACTTT TCAGCGAAGA AATTTTTACA ATATGTAGCA GCATTAAAAG GTGTAGATAA AAGGGAAGCG AATAACAAAA TAGAAGAATT ATTAAAGTTA GTTGGACTCT ATGACGTAAG AAATAAAGCG GTTGGAAAAT TTTCAGGAGG AATGAAGAGA AGAGTAGGAA TTGCTCAAGT TTTATTAAAT GATCCTAAGA TTATTATATT AGATGAACCA ACAGCAGGAT TAGATCCACA AGAGCGAACT AGATTTCGAA ATCTATTATC GGAGATATCC AAAGATAAGA TAATAATACT TTCAACTCAC ATTATTTCTG ACATAGAATC CATAGCAAAA GAAACTATTA TGATAAAAGA GGGTGAAATC ATAATGAAGG GAAGTCATAG GGAAATTCTA TCTGATATGA ACGAAAAAGT ATATAGAATA AGAACAAATG ATGAAAATGA ATTGGCAGAA ATACAACAGA AATACAAGGT AGTGAATCTA CAGAGAGGAA TTGATTCTAC GGAACTTAGA ATTGTAAGCG ATAAAGCCAT TTCCTATGAA AATGTAGAGG TTATAGAACC TAAATTTGAG GATGTTTATA TGTTCTATTT CGATTTAGAA AACACAAAGG AGGTATAA
|
Protein sequence | MNKLEIKKLT KSYGKKNANS NITLTLENGV YGLLGPNGAG KTTLMKQIAT LIKPTSGEII YNDNNIYSME DNYRGVIGYL PQEFGAYKNF SAKKFLQYVA ALKGVDKREA NNKIEELLKL VGLYDVRNKA VGKFSGGMKR RVGIAQVLLN DPKIIILDEP TAGLDPQERT RFRNLLSEIS KDKIIILSTH IISDIESIAK ETIMIKEGEI IMKGSHREIL SDMNEKVYRI RTNDENELAE IQQKYKVVNL QRGIDSTELR IVSDKAISYE NVEVIEPKFE DVYMFYFDLE NTKEV
|
| |