Gene Cphy_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1984 
Symbol 
ID5744664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2450413 
End bp2451300 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content32% 
IMG OID641293081 
ProductABC transporter related 
Protein accessionYP_001559091 
Protein GI160880123 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TTGAAATAAA AAAATTGACA AAAAGTTATG GTAAGAAAAA CGCAAATAGC 
AACATAACAC TTACCTTGGA AAATGGTGTA TATGGGCTTT TAGGCCCGAA TGGAGCTGGT
AAGACTACAC TCATGAAACA AATAGCAACA TTGATTAAGC CTACATCTGG AGAGATCATC
TACAATGATA ACAACATTTA TAGTATGGAA GACAACTATA GAGGGGTTAT AGGTTATTTA
CCACAAGAGT TTGGTGCTTA TAAAAACTTT TCAGCGAAGA AATTTTTACA ATATGTAGCA
GCATTAAAAG GTGTAGATAA AAGGGAAGCG AATAACAAAA TAGAAGAATT ATTAAAGTTA
GTTGGACTCT ATGACGTAAG AAATAAAGCG GTTGGAAAAT TTTCAGGAGG AATGAAGAGA
AGAGTAGGAA TTGCTCAAGT TTTATTAAAT GATCCTAAGA TTATTATATT AGATGAACCA
ACAGCAGGAT TAGATCCACA AGAGCGAACT AGATTTCGAA ATCTATTATC GGAGATATCC
AAAGATAAGA TAATAATACT TTCAACTCAC ATTATTTCTG ACATAGAATC CATAGCAAAA
GAAACTATTA TGATAAAAGA GGGTGAAATC ATAATGAAGG GAAGTCATAG GGAAATTCTA
TCTGATATGA ACGAAAAAGT ATATAGAATA AGAACAAATG ATGAAAATGA ATTGGCAGAA
ATACAACAGA AATACAAGGT AGTGAATCTA CAGAGAGGAA TTGATTCTAC GGAACTTAGA
ATTGTAAGCG ATAAAGCCAT TTCCTATGAA AATGTAGAGG TTATAGAACC TAAATTTGAG
GATGTTTATA TGTTCTATTT CGATTTAGAA AACACAAAGG AGGTATAA
 
Protein sequence
MNKLEIKKLT KSYGKKNANS NITLTLENGV YGLLGPNGAG KTTLMKQIAT LIKPTSGEII 
YNDNNIYSME DNYRGVIGYL PQEFGAYKNF SAKKFLQYVA ALKGVDKREA NNKIEELLKL
VGLYDVRNKA VGKFSGGMKR RVGIAQVLLN DPKIIILDEP TAGLDPQERT RFRNLLSEIS
KDKIIILSTH IISDIESIAK ETIMIKEGEI IMKGSHREIL SDMNEKVYRI RTNDENELAE
IQQKYKVVNL QRGIDSTELR IVSDKAISYE NVEVIEPKFE DVYMFYFDLE NTKEV