Gene Cphy_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1894 
Symbol 
ID5744573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2340490 
End bp2341062 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content40% 
IMG OID641292991 
Productcyclase family protein 
Protein accessionYP_001559002 
Protein GI160880034 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.853082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCT ATGATATCAC TCAGGAACTG TTCTCTGGCC GCATATTTCC GGGAGATATG 
GCCCCTAGAT ATGAAAGGGT TAAGGAAACT ACAAAAGGGG ATGTCTGTAA TTTAACCGTT
TTACATATGT GTGCGCATAA TGGAACACAT ATAGATGCTC CTTTTCATTT TATTGATGGT
GGAAAAACCG TCGATCAAAT TGACTTAAGG CGAGTGATTG GGGAGTGTAC TGTAGTGGAA
CATGAGGGTG TACTTACCAG TGAGGATGTT CAGCGAATCA TGCTAAAAGG GAAAGAAAGA
ATACTATTAA AAGGGAAAAC GGTAGTATCT TTTGAAGCAG CACAGGAATT CAATCATTTT
GGGGTATTGT TGGTTGGAAA TGAATCACAG ACAGTAGGTC CGGAAGATTC AGCAATGCAG
GTTCATCTAG AACTTTTATC GAATGAGGTA GTATTACTAG AAGGAATTAA TTTATCGAAT
GTTCCGGAAG GAGATTATTT TCTATTTGCT GCTCCATTAA ATCTTGGTGG AGCGGATGGT
GCACCATGCC GTGCAGTTTT AACACGTTCG TAG
 
Protein sequence
MEIYDITQEL FSGRIFPGDM APRYERVKET TKGDVCNLTV LHMCAHNGTH IDAPFHFIDG 
GKTVDQIDLR RVIGECTVVE HEGVLTSEDV QRIMLKGKER ILLKGKTVVS FEAAQEFNHF
GVLLVGNESQ TVGPEDSAMQ VHLELLSNEV VLLEGINLSN VPEGDYFLFA APLNLGGADG
APCRAVLTRS