Gene Cphy_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1893 
Symbol 
ID5744572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp2339627 
End bp2340271 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content34% 
IMG OID641292990 
Producthypothetical protein 
Protein accessionYP_001559001 
Protein GI160880033 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.570365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC TCATATTTAG TTTGTTTGGC TACCTTAGTG GTAGTATCTT ATTTGCTTAT 
TGGATTCCAA AGAAAATCAA ATACATCGAT GTTCGGGAAT TAAGTGATGA TGGGAATCCT 
GGTACTGCCA ATGCTTTTTT GTATGGCGGT GCTTTTTGTG GCGTTTTAGT TCTACTTTGT 
GAACTATTAA AGGGAATACT GCCTATTTTT ATCAGTACAA AAGTGCTTGA TATAACAAAC 
AATGGATTTT CCTTTGTAAT GGCAGCGCCA GTACTTGGAC ATGCATATTC AATGTTTCAT 
AAGGGAAAGG GAGGAAAGGC AATTGCTGTT TCTTTTGGTG TACTTCTTGG GCTTATACCT 
GAAGTAAGAC CAGTGTTATT ATTGATTTTC TTTTACCTTT TATTCTCTCT ATTTTTTATA 
ATTCGTCCTC ATTTGCATCG CTCAATCTTT ACCTTTTTAT GTTTTTCCTT GTGTTGTTAT 
CATTTATTAA AGATTCAATC ACTAACAATC GGATGTATTT TCATAGCTTT GATCGTCATC 
TTAAAGCACC TTCATGCATT CCATGGTGAA GCACTGGAGG TATTTTTACT TCATAGGAAA 
ATCTATGGGA AAATGCAGAA GGATGAGGCT TCAAATCATT TATAA
 
Protein sequence
MKYLIFSLFG YLSGSILFAY WIPKKIKYID VRELSDDGNP GTANAFLYGG AFCGVLVLLC 
ELLKGILPIF ISTKVLDITN NGFSFVMAAP VLGHAYSMFH KGKGGKAIAV SFGVLLGLIP 
EVRPVLLLIF FYLLFSLFFI IRPHLHRSIF TFLCFSLCCY HLLKIQSLTI GCIFIALIVI 
LKHLHAFHGE ALEVFLLHRK IYGKMQKDEA SNHL