| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1857 |
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| Symbol | |
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| ID | 5743146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2284398 |
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| End bp | 2287055 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641292954 |
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| Product | ABC transporter related |
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| Protein accession | YP_001558965 |
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| Protein GI | 160879997 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0462324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAA TTAAAAACAT ATCAAAAAAA TACGCTACGA AGTATCTGGT TCAGTCTGCG
CTTGATGACG TCAGCTTAAC ACTTCGTGAC AATGAATTTG TTGCAATCCT TGGACCAAGT
GGTTCTGGTA AAACAACATT ATTAAATATC ATTGGTGGTT TAGACCGTTA TGATAGCGGT
GATTTAATCA TTAATGGTAT CTCAACGAAA AAATATAAGG ACCGTGATTG GGATTCCTAT
AGAAATCATA CCATTGGTTT TGTTTTTCAA AGTTATAACT TAATCCCTCA TCAATCCATC
TTATCCAATG TAGAATTAGC CCTCACTATT TCGGGTATCT CTAAAAAGGA AAGAAAAAGA
TTATCAACGG AAGCTTTAGA AAAAGTAGGC CTTGGAAATC AGATTCATAA GAAACCAAAT
CAACTCTCCG GTGGACAGAT GCAGCGTGTA GCGATTGCTA GAGCACTTGT CAATAATCCT
GATATCCTTT TAGCAGACGA ACCAACAGGA GCACTGGATA CAGAAACAAG TATTCTTGTT
ATGGATTTAT TAAAAGAAAT TGCGAAAGAT CGATTGGTTA TTATGGTTAC CCATAATCCT
GAACTTGCAG AACATTATGC TACAAGAACA GTAAAACTTC GTGATGGTAA GATAATCGAT
GATTCCGATC CATATCAAGA GAATCAACAG GATGTAACAA AGCCAGAACA TAAATCAATG
GGAAAAACTT CAATGTCATT CCTTACCGCA CTATCTCTTA GCTTAAATAA CCTAAAAACC
AAAAAGGCAA GAACAATTCT TACTGCATTT GCTGGAAGTA TTGGTATTAT TGGTATTGCT
CTTATACTAG CTCTTTCGAG TGGTATTAAT AATTATATTG AAAATGTACA AAAAGATACC
CTATCCACTT ATCCAATCAG TATTGAGAGA GAAAGTATCG ATATGACATC GATGATGTCT
ACGATGATGG AGCATAATCG CTCAAATGGT ATCACACATG ATCTGGATAA AATTTATTCG
AATAATATTG TTACCGGTAT GTTTTCTACC TTAAGTGAAG AAAAGAAAGC GAATGATTTA
GGTGCATTTA AAGAATATAT CGAACGTGAA GATTCGAAGA TAAACGATTA TGTATCTACC
ATTCAATACG GTTATGATTT GGATTTACAA ATCTATAGTT CAGATACAAC TAACGGTGTA
ACACAATTAA ATCCAAGCAA ATTGTTTAAC AGATCTGGAA TGAGTGGAAT GAGTGGAATG
AGTGGAATGG GCGGAATGAG TGCTCAAAGC ATGGGTATGA TGTCTTCCAA TGTATTTTCA
GAGATGTTAG GAAATAAAGA ACTATTAGAA TCTCAATATG ATGTTCTTGC AGGACGTTTC
CCAGATGAAG GTGCTTATAA CGAAGTTGTG CTTGTAGTTG ATAAAAATAA TGAAATCAGT
GACTTCGCTC TTTACACCAT GGATTTTATG AATCAGGAAG ACTTTAAAAA TATTCAAAAA
TCATTAGCCA AAGGTGAAGA TGTCAAAGAA CCTGACCAGG CGTCGTTTAC TTACGATGAA
GCGTTGAATA AGACTTTTAA ATTTGTCCTT AATACAGATT ACTATGTATA TAACAAGGAA
ACTGGTGTTT GGAAGGATAT GCGCGAAGAT AAATCATTTA TGACCAAATT GGTGGATGAC
TCATTGGAAT TAAAAATTGT TGGTATCCTA AAGCCAAATC CAGAAGCAAG TGCATCCTCC
ATTAATGGTG CAGTTGGATA TACCTCCGCT TTAACCGAAT ATATCATTAA TAAAATCAAT
AACAGTGACA TTACAAAAGC TCAACTTGCA GATAAGGAAA CAAATGTCTT TACGAATATG
CCTTTTGATA TGAATGGATA TATGGAAAAC ATAACAATGG CAGAAATCAA TGATTTCGTA
AAAACATTGT CTGAGGAAGA ACAACAGCAG TTTAAAGTGC TTAGCTCTAC AATGACAGAA
GATCAAATAA TTGCTACCTT TGGAGAACAA ATTCGTTCTG CAGCCGGTAA GGAAACTACC
TATGAAGATA ACATAGCACA GTTAGGAATT GTAAATCTTG ACCAGCCTTC TACAATCAAC
CTCTACCCTA TTAACTTTGA AGCAAAAGAT GCTATAGCAA AAATTGTTGA AGATTATAAT
ACAATCCAAA AAGACGCTGG CCATGAAGAT ATGACCATTA GCTATACCGA TCTCGTTGGT
TTAATGATGT CTTCTATCAC AACCATCATC GATATGATTA GTTATGTTTT AATTGGCTTT
GTAGCAATTT CACTTGTCGT TTCCTCCATC ATGATTGGAA TTATCACCTA TATATCTGTT
TTGGAGAGAA CAAAAGAGAT TGGTATCTTA CGAAGTATTG GAGCTTCAAA ACGTAATATT
TCCAGTATCT TTAACGCTGA AACATTAATT ATTGGATTTA CTTCAGGTAT GCTTGGTATC
GTTATTTCGC TCTTACTATT AATACCGATT AATGCTATTA TTGCTTCCTT ATCCGGTATT
TCTAAAATTG CAATATTACC ATGGGGCTAT GCAATCGTAC TTGTGGTTAT TAGTATGATA
TTAACATTAA TTGCAGGTTT GATTCCTTCT AAGAAAGCAG CTAAGAAAGA TCCTGTAACA
GCACTTAGAT CAGAGTAA
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| Protein sequence | MLQIKNISKK YATKYLVQSA LDDVSLTLRD NEFVAILGPS GSGKTTLLNI IGGLDRYDSG
DLIINGISTK KYKDRDWDSY RNHTIGFVFQ SYNLIPHQSI LSNVELALTI SGISKKERKR
LSTEALEKVG LGNQIHKKPN QLSGGQMQRV AIARALVNNP DILLADEPTG ALDTETSILV
MDLLKEIAKD RLVIMVTHNP ELAEHYATRT VKLRDGKIID DSDPYQENQQ DVTKPEHKSM
GKTSMSFLTA LSLSLNNLKT KKARTILTAF AGSIGIIGIA LILALSSGIN NYIENVQKDT
LSTYPISIER ESIDMTSMMS TMMEHNRSNG ITHDLDKIYS NNIVTGMFST LSEEKKANDL
GAFKEYIERE DSKINDYVST IQYGYDLDLQ IYSSDTTNGV TQLNPSKLFN RSGMSGMSGM
SGMGGMSAQS MGMMSSNVFS EMLGNKELLE SQYDVLAGRF PDEGAYNEVV LVVDKNNEIS
DFALYTMDFM NQEDFKNIQK SLAKGEDVKE PDQASFTYDE ALNKTFKFVL NTDYYVYNKE
TGVWKDMRED KSFMTKLVDD SLELKIVGIL KPNPEASASS INGAVGYTSA LTEYIINKIN
NSDITKAQLA DKETNVFTNM PFDMNGYMEN ITMAEINDFV KTLSEEEQQQ FKVLSSTMTE
DQIIATFGEQ IRSAAGKETT YEDNIAQLGI VNLDQPSTIN LYPINFEAKD AIAKIVEDYN
TIQKDAGHED MTISYTDLVG LMMSSITTII DMISYVLIGF VAISLVVSSI MIGIITYISV
LERTKEIGIL RSIGASKRNI SSIFNAETLI IGFTSGMLGI VISLLLLIPI NAIIASLSGI
SKIAILPWGY AIVLVVISMI LTLIAGLIPS KKAAKKDPVT ALRSE
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