Gene Cphy_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1805 
Symbol 
ID5743094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp2228494 
End bp2229168 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content33% 
IMG OID641292902 
ProductXRE family transcriptional regulator 
Protein accessionYP_001558913 
Protein GI160879945 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGCTTAG ATAAAGGATA TTCAGATTCT ATACCGTGCA ATGATATGAC AGAATTAGGA 
GCTATCATAA AGACGGCAAT GACAGAGCAG TCTTTGTCTT TACGGAAATT AAGCGAACTA 
TCTGGAATTA GTTCTGCTAG TATATCCAGA ATATTGTCTA ACAAGCAACC TGCTAATATA 
CACCACCTAC AAGTATTTTC CAAACAATTA AATATACCGA TTGAACAATT ATTAAATTCA 
GTTGGCATCG GTGTCAGTGA AAAAATGAAT ACTGATTCTA ATATCATAAT GAATATGATT 
TGCGATGTAC TGAAATCATT TGATCTAGAG TTGGATGAAA TTATAAACGA TATACAAAAA 
GAATTAAAAA AATACGAGTT GTACGCGAAA ACATCGGCAG GAAAAGATCT TATTCTTAAC 
AATTTTGTAT CCAAGCTAAA CGAGTTAAAT GGAGCAGGAG CCATCATTAA TCAATTGAAT 
GCACTATTTG AATTGTTTCG TTCAAAAGAT ATCGAACCAG GTGCAAAAGC TGTAATCGGA 
AGCACTTTAC TTTATTTTAT TCATATGCCA GACGCCATTC CAGATTATGC TTTCCCTATA 
GGATATTTAG ATGACGCTAT CGCAGTCACT TTAACTGTAA ACCGTCTTTC ACAAGAATTT 
CATATTTCTT TATAA
 
Protein sequence
MCLDKGYSDS IPCNDMTELG AIIKTAMTEQ SLSLRKLSEL SGISSASISR ILSNKQPANI 
HHLQVFSKQL NIPIEQLLNS VGIGVSEKMN TDSNIIMNMI CDVLKSFDLE LDEIINDIQK 
ELKKYELYAK TSAGKDLILN NFVSKLNELN GAGAIINQLN ALFELFRSKD IEPGAKAVIG 
STLLYFIHMP DAIPDYAFPI GYLDDAIAVT LTVNRLSQEF HISL