| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1763 |
|---|
| Symbol | |
|---|
| ID | 5741437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2169265 |
|---|
| End bp | 2170761 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641292863 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001558874 |
|---|
| Protein GI | 160879906 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA TCATCATTAT TGGTGGAGGT ATAGCTGGAT TGAGTGCAGG TATTTTTGCC
CAGAGGAATG GATTTGAAAG TATAATTTTG GAGAAGAACC AAACTTTAGG CGGGGAATGT
ACCGGCTGGG ATCGTCAAGG CTATCACATT GATGGATGTA TTCATTGGCT GGTTGGGACT
AAAAAAGGAA CTCCGATTCA CGATCTTTGG ACAGCTGTAG GTGCCCTGGA TGGGGTTGAA
ATCTACAATC CTGAAAGCTT TCTGGCTTTT GAACATGAAA GTGGTGTCAC AGTACATTTG
TATCGTGACC TTGACCGACT GAAATCTAGT TGGGTAGAAA TATCACCTCA GGACGAGGAT
TCTATTAATC ATTTTTGCAA AACCATAAAG CAGCTGCACT CTTATGAAAT ACCAGTTGAA
AAACCAAATG ATTTGATGGG ATTAGGGGAA AAAATCAAAT TCATGATTTC AATGAAGGAC
GTCGGTATGA TAATGCAGAA GTTTGGTAAG ATGAACTTAA AGGAGTATGC TAAAACCTTT
AAGCACCCGG CGTTGAGGGA GATACTTTCT TCCTTTTTAC CAGATGGCCA CAGTGCCTTG
TCAGTTTTCT TTGCATTGGC ATCTTTTACA AAAGGTCAAG CTTCTATTCC TTATGGAGGT
TCCAAAAAAT TTGCACTTCG TATGGTAGAG CGTTATCTAA GCTTAGGTGG TACCATAGAA
ACCTCTTGTG AAGCCACTGA GTTGAGCATC GACCGCAATA AGGCTGACCG TGTGATTTGC
AGCAATGGTA AGAGCTTTGA AGCTGATTAT TTTATTGCTG CCTGCGATGC CCATTTGCTC
TATAATGGAT TGTTAAAGGG AAAGTATCCT GATCCTGAAT TTGAAAAACG ATATAATAAT
CCCATAGACT ATCCGTTAGG TTCAGAAATC CATATAGCAA TAGGTTATGA AGGCGCAATG
GATGATATTC CGAGAACTCT GCGCTTTCCT GTTACTCCAA TTAAGATTAA TGAATCAACG
ATAGATTTTT TAACAATGAC TCATTATAAC TATGAGCCAG ACTTTGCTCC CGATGGAGGT
ACCCTGATTG CCTGTAGTAT TAACCAATTC CATACAGATT TTGATAAGTG GCATGCTCTT
ACTAAAGATT CCAACTCCTA TGAATGCGAA AAAGCGAGAA TTGGTAATGA GGTCGTCCGA
GCAATTGAAA TACGCTTTCC TCAGATGAAG GGAAAACTCA AGTTGCTTGA TGTGGCTACT
CCGAAAACAT TTGAACGGTA CTGTAACGCT TATCGGGGTG CTTTCATGTC ATTCTTACCT
ACGATTAATG GAAGGATGAT GTCCCACACA GGAAAAATCA AAGGGTTGCA AAATATCTTT
TTAAGCGGTC AATGGCTCCA ACCGCCTGGC GGATTGCCTG TGGCATTGAT TACTGGAAAA
TACACAATTA TGCGGCTTTG TAAAATAAAA AAACAGCCGT TCAGAAATAT CGCGTGA
|
|---|
| Protein sequence | MNKIIIIGGG IAGLSAGIFA QRNGFESIIL EKNQTLGGEC TGWDRQGYHI DGCIHWLVGT
KKGTPIHDLW TAVGALDGVE IYNPESFLAF EHESGVTVHL YRDLDRLKSS WVEISPQDED
SINHFCKTIK QLHSYEIPVE KPNDLMGLGE KIKFMISMKD VGMIMQKFGK MNLKEYAKTF
KHPALREILS SFLPDGHSAL SVFFALASFT KGQASIPYGG SKKFALRMVE RYLSLGGTIE
TSCEATELSI DRNKADRVIC SNGKSFEADY FIAACDAHLL YNGLLKGKYP DPEFEKRYNN
PIDYPLGSEI HIAIGYEGAM DDIPRTLRFP VTPIKINEST IDFLTMTHYN YEPDFAPDGG
TLIACSINQF HTDFDKWHAL TKDSNSYECE KARIGNEVVR AIEIRFPQMK GKLKLLDVAT
PKTFERYCNA YRGAFMSFLP TINGRMMSHT GKIKGLQNIF LSGQWLQPPG GLPVALITGK
YTIMRLCKIK KQPFRNIA
|
|---|
| |