Gene Cphy_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1677 
Symbol 
ID5741508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2057338 
End bp2058771 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content46% 
IMG OID641292777 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001558788 
Protein GI160879820 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGT TTGCGAAAAT CTTTCTCTGT GCAATGATCG TCCTCAGCAT CGCGTTGTCC 
CTGTCCGGTT ATCTGCTCAT AACGTTGTCA TACAAAAATG CGGTTGATCA GGAAACGCAG
CGCACAATGG ATCAGTATCA GTATATCAAG TTTCTGCTTC AGGCCGACCT TCTAAATCGA
CGGGATCAAA CCGATAAAAA CAATTTATCT GATCCGATTT CTGCAAGCTT TTCAAAGCTC
GCAGGTCAGA ATTTGCCCGG CTTATCAAGC GGCGGGAATT ACATTTCTGT TTTTGGTGAA
GATAAGATGT CCATATATTC GACCTTTCCC TCTAATCCGG ATTTCAATAT ATCCGACTAC
GACTTAAATC AAAAAATCGT CAATAAAATA GAGCAAATTG GGGACAGGAC CTATGTTTTA
GTGCTCGGTA AGATCACGCA GAGCGGCCAG ACGGTTTATC TCTTGACCGC AACCGATATT
CAGGCCGTTA TCGACCAAAA GGAAGAAATG GTCCGGAATT ACGGTACGAT TTATTTCGTA
ACGATAGGCT TTGGCATTAT TCTGGTTATG ATCTTTTCCG CTTTGCTGAC CGGTCCAATC
CAAAAGATGT CGGCGGCTGC AGCCAGGGTC GCCCACGGTA ATTACAGTGA ACGGCTTAAG
GTTTTTTCTA ATGATGAAAT GGGAGAACTT TCAAGGAGGT TCAATACGAT GGCGGAAACA
ATTGAGGATA GAATCGCAGA GCTTTCAAAT GCTGCAAAGC AGAAAGAGGA TTTTGTCTCC
AATTTTGCCC ATGAACTGAA AACGCCTTTG ACATCGGTCA TAGGTTATGC AGATATGATC
TATCAGAATC CATTGTCTCG AGAGGATACC AGAAAAGCGG CGGCACACAT TATGGACGAA
GGCCTCCGCC TCGAGGCACT CTCGCTCAAG CTGATGGATC TGATCGTTTT AAACCGGCAG
GATTTTATCC TTGAGGAACT TCCGGCGGAT GAGCTCCTGC AGAATATTGC GGATACGCTG
AGGCCGTTGT TATTAAACGA AAATATAAAA TTCAAGTTGG AAACGGTGAA AGCCTATATC
AGAGTCGACT ATGACCTTTT CAAAACGCTT CTGCTCAATC TCGTAGACAA CGCGGTCAAA
GCGGGAAGCG CGGAAATTAG CTTGACTGGG GAAATTACGG CGAACAGCTA TCGCATCGGC
ATTTCGGATA ACGGGCGCGG TATTCCGGCA GACGAGCTGG ACCGCATCAC AGAGGCATTT
TATATGGTGG ACAAGTCCCG ATCCAGAAAA CAGCACGGTG CAGGCCTCGG CCTTTCGCTT
GCTTCAAAAA TAGCTCAAAT ACACGGCAGC CGGTTGGAGT TTGAAAGTGT GCAGGGAAAG
GGAACGACGG TTTCTCTTCC TTTACCGTTG GAAGGTGGTG GATTGGGTGC TTAA
 
Protein sequence
MKLFAKIFLC AMIVLSIALS LSGYLLITLS YKNAVDQETQ RTMDQYQYIK FLLQADLLNR 
RDQTDKNNLS DPISASFSKL AGQNLPGLSS GGNYISVFGE DKMSIYSTFP SNPDFNISDY
DLNQKIVNKI EQIGDRTYVL VLGKITQSGQ TVYLLTATDI QAVIDQKEEM VRNYGTIYFV
TIGFGIILVM IFSALLTGPI QKMSAAAARV AHGNYSERLK VFSNDEMGEL SRRFNTMAET
IEDRIAELSN AAKQKEDFVS NFAHELKTPL TSVIGYADMI YQNPLSREDT RKAAAHIMDE
GLRLEALSLK LMDLIVLNRQ DFILEELPAD ELLQNIADTL RPLLLNENIK FKLETVKAYI
RVDYDLFKTL LLNLVDNAVK AGSAEISLTG EITANSYRIG ISDNGRGIPA DELDRITEAF
YMVDKSRSRK QHGAGLGLSL ASKIAQIHGS RLEFESVQGK GTTVSLPLPL EGGGLGA