| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1509 |
|---|
| Symbol | |
|---|
| ID | 5744331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1857328 |
|---|
| End bp | 1857891 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641292611 |
|---|
| Product | hemerythrin HHE cation binding domain-containing protein |
|---|
| Protein accession | YP_001558622 |
|---|
| Protein GI | 160879654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3945] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0220946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGAG TAGATATCTT AGTAAAAGAA CATGAGAATA TTAAAAGAAT GGCAAAAGTT
ATGAGAGCTG CAAGCTTACA AGTTTTTAAT GGAGAAGAAT TAGTAACGAA AGACTTCTAT
CAAATGCTTG ATTTCGTTCG TAATTATGCA GATAAGCATC ATCATAAAAA AGAAGAAGAT
ATCCTTTTTG AGTATATGAA AAAGGAACTT GGTAAGTTGG CGCAGAATCT GATTACCAAT
GGAATGTTAG TGGAGCATGA TTTGGGCAGA CTTCATATGA GAGAGCTTGA AGCTGCATTA
CAAGAATATG AAGCTAACAA TAGTGTAGAT GCAAAATTAG ATATTGTCGT AAATGCCACA
GCATATACTT ATTTAATTAA TCGTCACATT GATAAAGAGA ACGAAGTAGT ATTTACTTTT
GGAGCAAAAA ATCTAACAGA AGAGAGTAGA ACTATTGTAG ACCAAAGAAC AAAAGAAATG
GAAGAAGGCG CTACCAAAGA GGGAGTGCAG GATAAATATT TAAAGGTATT AGAGGAATTA
GAAAAAAAGT ATATATTAGG ATAG
|
|---|
| Protein sequence | MYGVDILVKE HENIKRMAKV MRAASLQVFN GEELVTKDFY QMLDFVRNYA DKHHHKKEED
ILFEYMKKEL GKLAQNLITN GMLVEHDLGR LHMRELEAAL QEYEANNSVD AKLDIVVNAT
AYTYLINRHI DKENEVVFTF GAKNLTEESR TIVDQRTKEM EEGATKEGVQ DKYLKVLEEL
EKKYILG
|
|---|
| |