Gene Cphy_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1356 
Symbol 
ID5743743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1692134 
End bp1694635 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content28% 
IMG OID641292460 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001558471 
Protein GI160879503 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGG AAGATATTGT TTTATCAGTT AAGGAATGGA ATAGAAAAGG GAATGTTTGT 
AATTCTCAAA AGGACTATGA TAAAGCTATT GAATGCTATA ATAAGGCAAT TCAAATAAAT
GAAAACCATG AATATCCTTG GAATGGTCTT GGAAATGTTT ATAACTCTCT AAAGGACTAT
GATAAAGCTA TTGAATGCTA TAATAAGGCA ATTCAAATAA ATGAAAATTA TAAAAATCCA
TGGAATGGCC TTGGAATTGT TTATAACTCT CTAAAGGACT ATGATAAAGC TATTGAATGC
TATAATAAGG CAATTCAAAT AAATGAAAAT TTTATAAATC CTTGGAATGG CCTTGGAAAT
ATTTATAGCT CTCAAAATGA TTATGATAAA GCTTTTGAAT GCTATAATAA AGCAATTCAA
ATAGATGAAA ATCAAGAAAA TCCTTGGAAT GGTCTTGGAA ATGTTTATTC CTTTCAAAAG
GACTATGATA AAGCTATTGA ATGCTACAAT AAGGCAATTC AAATAAATGA AATTTTTGAA
AATCCTTGGA ATGGTCTTGG AAATGTTTAT TCTTTTCAAA AGGACTATGA TAAAGCTATT
GAATGCTACA ATAAGGCAAT TCAAATAAAT GAAAATCAAG AAAGTCCTTG GAATGGTCTT
GGAAATATTT ATTACTTTCA AAAGTACTAT GATAAAGCTA TTAAATGCTA CAATAAGGCA
ATTCAGATAA ATAAAAATTA TGAACTTCCT TGGAATGGCT TTGGAAGGGT TTATGAAAAA
CAAAAAGACT ATAATAAAGC TATTGAATGT TATAAAAATT CGTTTGCTAT TAATCCAAAT
TATAGATCTC CATATAACAA TCTCACTAAT TTATGTGAAA AGTTAGAAAA AGAAAAAAAT
TTTACCTATA ATATTGAAAA ATTATTAGAA TTTAATCCAT CAAATCAAGA AGCATATAGG
ATATATGGAA ATTTTTTGAT GGAATGGAAA CTATTAAATG AATCACCAAA AAGTTTAAAT
AAAATAAGAA GTTTTTTTGA AACATCAATA AGATATTATG AATCTGTTAA AGATAATTCT
GGAATCTCTT TATCTAGAAT CAGTTTGGAA AAATTAGAGT CATTGCTAAA TGATCTAAAT
GATAACGAGA CCAAACAAAA AAATGATATT AATTCTCCAA TGCATAAAGT TATGTATGCT
ATTAAGGAAA GTAAAATAAG AGACAAATCT AATATTACAA AAAGGTCGTT TTTACCTTTT
ATTAACGCAA ATTTTGAGTA TAAAGATGAC TTAACTACTG TTGAAAATGA ACCACAAGTC
TATTTTGAGG TTCTTAGAAG ATGGAATTCT TATACCCCAA TTATTGCAGA TAATTATGAG
GTAAGTAAAG GTGGGGGTTA CTTTATTAAA TATAGGGACA AGGGAATTAT AATCGACCCA
GGATTCAATT TTATTGATAA TTTTAAAAAT GCAGGTCATT TTTTTAAAGA TATTGATATG
ATATTTATTT CACATGCACA CAATGATCAT ATGGCTGATT TAGAATCAAT TTTAACCCTT
CTCCACAAAT ATAATGATGA GATAAAAGAA TCAGATGATC TTTCTAAGGA AGATACAATA
AAAAAAGAAA TTTCAAAACG AGATAATATT TCATATAATG AAGTAACTGC TGAAAATATA
GAAAAGGAGT TTTTAAAATC TAATAGAAGA AAAATAATAG AATTCTATAT GCCATTAAGT
GTTTTCAAAT TTTATTCGGG TCTTTTTGAA TTAACTGCTA AAACTAATTA TAGAATTCAC
ATTATTGAGG ATGGCTCCAT ATGTAGTTTG GGTGATAAAT ATACTACCGA TACTAGGGAT
TCATTTAGAA TACGAACAAT AAGAGCAAAG CACAGAGATA TGATTTCTGA TATTTGCGCG
ATTGGTCTTT CGATTGAATT CAAAAATTTA GTAATTCTCT ACACAGGCGA TACAGGATGG
GATGAAAATA TAGGAGTTCA ATATTCAGAA CTAAAGGCTT CCTATCAGGA AAAGAACGTT
ATTTTACTGG CTCATATAGG TGGATTTAAA GATTGTGAGG ACAATTATTT AACCGGTGGA
AAAGATTCGG ATATATTTTA CAAGAATCAT CTTGGAAGAT TAGGTTTAGT TAAATTGAAC
GAAGAACTTA AGCCTGATAT GTGCCTTATA TCTGAATTTG GCGAAGAATT TAAAGGCAAC
CGAACTGATT TAGCTGCTAT TTTTCAAGAA GCCTTTGAAA ATAAAATTTT ATTTTTCCCG
GTAGATATAG GGTTTCGGCT AGATATGAAT AATAGAAAAA TAAAATGTAT TCAGAATGCT
GAAGAAAATC CATATTCACT TAAATATTCC TATAAAGATC CTTGTGATGT AAGAGCCTAT
GAGCATAAGA AAAATTATTC CTTGCACTAT TATGATAGGA ATCTTGACTC AAGGCTGATA
ACTGCAGTTG TATCTGAACT GGTTAGTCAG AACAAATTGT GA
 
Protein sequence
MEVEDIVLSV KEWNRKGNVC NSQKDYDKAI ECYNKAIQIN ENHEYPWNGL GNVYNSLKDY 
DKAIECYNKA IQINENYKNP WNGLGIVYNS LKDYDKAIEC YNKAIQINEN FINPWNGLGN
IYSSQNDYDK AFECYNKAIQ IDENQENPWN GLGNVYSFQK DYDKAIECYN KAIQINEIFE
NPWNGLGNVY SFQKDYDKAI ECYNKAIQIN ENQESPWNGL GNIYYFQKYY DKAIKCYNKA
IQINKNYELP WNGFGRVYEK QKDYNKAIEC YKNSFAINPN YRSPYNNLTN LCEKLEKEKN
FTYNIEKLLE FNPSNQEAYR IYGNFLMEWK LLNESPKSLN KIRSFFETSI RYYESVKDNS
GISLSRISLE KLESLLNDLN DNETKQKNDI NSPMHKVMYA IKESKIRDKS NITKRSFLPF
INANFEYKDD LTTVENEPQV YFEVLRRWNS YTPIIADNYE VSKGGGYFIK YRDKGIIIDP
GFNFIDNFKN AGHFFKDIDM IFISHAHNDH MADLESILTL LHKYNDEIKE SDDLSKEDTI
KKEISKRDNI SYNEVTAENI EKEFLKSNRR KIIEFYMPLS VFKFYSGLFE LTAKTNYRIH
IIEDGSICSL GDKYTTDTRD SFRIRTIRAK HRDMISDICA IGLSIEFKNL VILYTGDTGW
DENIGVQYSE LKASYQEKNV ILLAHIGGFK DCEDNYLTGG KDSDIFYKNH LGRLGLVKLN
EELKPDMCLI SEFGEEFKGN RTDLAAIFQE AFENKILFFP VDIGFRLDMN NRKIKCIQNA
EENPYSLKYS YKDPCDVRAY EHKKNYSLHY YDRNLDSRLI TAVVSELVSQ NKL