Gene Cphy_1248 details

Gene Information

• Locus tag: Cphy_1248
• Symbol: spoVFB
• ID: 5744854
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 1577527
• End bp: 1578117
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641292354
• Product: dipicolinate synthase subunit B
• Protein accession: YP_001558365
• Protein GI: 160879397
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR02852] dipicolinic acid synthetase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAT CAGGTAAGAA TGTTGGTGTA GCACTAACTG GCTCATTTTG TACCTTTGCA 
AAAACAATAC AAGAAATTCA AAATATAGTG AATGAACAAG CAAATGTAAT ACCTATCTTT 
TCTTTTAATG CTCAAACCAT CGACAGCCGT TTTGGTAAAG CAGCTGATTT TATGGAGCAA 
ATTACAAAAA TCACTGGAAA TAAACCAGTC TTAACAATCG CCGGAGCAGA GCCACTAGGT 
CCTAAGGGAA TGATTGATAT CATGATTATT GCTCCATGTA CTGGTAACAC CCTCGCTAAA 
TTTTGCAATG GCATCACCGA TACTCCAGTC CTAATGGCTG CGAAAGGTCA TTTGCGGAAT 
CAAAAACCAC TCGTTATTTC CTTAGCTACC AATGATGCAC TCGGCATTAA CTTTAAAAAT 
GTAGGCTACA TGTTAAACTG TAAAAATGTA TACTTTGTAC CATTTGGTCA GGATGATTTT 
AATAAAAAGC CGAACTCTAT GATTTCTAAT ACCTCACTCA TCATTCCGAC TCTTGAGTTA 
GCGATGGAAG GGAAACAAAT TCAGCCTATT ATTGAGAGTC CAGAAGGTTA A 

 

Protein sequence

MKLSGKNVGV ALTGSFCTFA KTIQEIQNIV NEQANVIPIF SFNAQTIDSR FGKAADFMEQ 
ITKITGNKPV LTIAGAEPLG PKGMIDIMII APCTGNTLAK FCNGITDTPV LMAAKGHLRN 
QKPLVISLAT NDALGINFKN VGYMLNCKNV YFVPFGQDDF NKKPNSMISN TSLIIPTLEL 
AMEGKQIQPI IESPEG