| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1246 |
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| Symbol | |
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| ID | 5744852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1573127 |
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| End bp | 1576243 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292352 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001558363 |
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| Protein GI | 160879395 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGC TTGAGTTAGC AATTAGTGGT TTTGGACCAT TTAAAGGTGA AGTTAATGTA
CCATTTGAAA AGATTGGAGA ATCAGGGCTT TTTTTAATCA GTGGTGATAC TGGAGCTGGT
AAAACGACGA TATTTGATGC AATTGCATTT GCATTATTTG GCTGTGCAAG TGGAGAAAAT
CGAACCACAG ATTCTATGCG CAGTGATTAT GCTACAGGTG ATGATAAGAC CTATGTTAAG
CTTGTATTTT CCCATAAAGG TAGACGATAT GAGGTTGAGA GAAATCCATT ATACCAAAGA
GCAAAAAAAC GTGGGGATGG ATTTACAGAG GAAAAGCCAA ATGCAACACT GATAAAATGG
GATGGTTCTG TGGTAGCAGG CTATCAACCG GTTACGAATG AGATCATGGA GATATTATCC
ATTGATTATA AGCAGTTTAA GCAGATCGCC ATGATTGCGC AGGGTGAGTT TATGAAACTT
CTTACGGCAA GCAGTGAGGA ACGTGGTGTC ATTTTCCGTA AGGTATTTCA AACGGGGAAT
TATGAAGCAA TGCAAAAGAA GTTAAAGTCC ATGGCTTCCG AATTAAGGGG GGAGTGTGAC
CAGCTAGAAC GTAGTATGGT TCAGTACCTT TCGGGAATTT TGCTATCTAA AGAAAATGAA
GTTTTAGAAG AGTGGAAGCG TAAGCCGGAT ATTCATAAAA TCAATGACTT ATTAGAGTTA
CTAGAGCTTG ACTTAGAGGA AGATAAATCG AGATATGATA CCTTAGAGGT GGAAAATAAA
GAGTTATCAG GTAAGCTTGT TGAGCTAACT ACGAAGATTA CGCTGGTAGA GGAACAAGAA
AAAAAGAAGC AGGAATTAGA GCAAAGAAGA CTACTTCTAG AGGATTTAAG AAAGCAATCG
GAGCAGATTA AATTAAACCA AATAGATCTT CAAAATGCAA AGAAAGCGTT ATATCAGGTA
AAACCAGTTG CAGATGCATA TCACAAAAGC AGAGTTGAAA CTGAAAATTT AGTTAGAGAA
ATTATAGAGC AGAAAAAACG ATTTGATATT GTTTCGGAAG AGACGAAGAA AAAGCAGGCA
GAATATCACG AGCATGAGAA AGATAAGGCT CGATTAGAAG AACTTGCAAT AGCCATCAAT
CAGTGTAAAG AAGAATTAGC ACAGTTTGAG AATCTAAAAC AATTGGAAAT AAAGATACAA
AGCAATCTTA AGAATCAGGA TGCTATTGTA TCGAATGAGA AAAAGATTGA AGAACAAGGT
AAGTTACTTA AGGGTGATCA TAGTGAACTT ACGAAGGAGC TTCAAGGATA TCTTTCTATT
GACCAAGAAA TCTTAGAATG TATCCAGATA GGGAAAGATT TAAAGTCAAA GATAACGAAA
CTAAAAAGTC TTTTAGATGA GCTGAATCGT ATTGAATTAG AGTCAAGTAA TTTAAAAGTG
TTACAACAAG AGTATTTTAA GAAAGAGAAT TCTTATCAAA CTGCAAATAA AGAGTATCAA
ACCTTAGAGT TAGCGTATTT TCGTGAACAA GCAGGCTTGC TTGCTATGAA TCTGAAAGGC
GAAGAACCGT GTCCTGTCTG TGGTTCTACC AAGCATCCAA AGAAAGCGGA ATGTAGTAAG
GAAGCGCCTA CGGAGGCTAT GTTAAATCAG GCGAAAGTAA AACTTGAGAG CGAAACGGTT
GTACTTAACC AGCAAAGTCT TTCTGTTAGT AATCAAAATA CTAAGATTTC TTTGATGTGG
GATAACTTAT GTGTGGTTTG TGAAGAACTT TTTGAAGAAT CGTTTGGCAA AGATAAAATA
AAAGATCGTA TTACGGAAGA ATTATCTCGC AGTGAAGAAG CATTCCTTCA GAAAAACGAA
GAATACAGAG TACTTAAGAA AAATCAAGAG AGAAGAGACT GGTGTAATAA ACGTACAACA
GAAATCTCTG CAGCTCTTGA AGAAAATGTA CAGAATATTC AGAACCTTAA TCAAGAGAAA
ATAGCAATTG CTACTGTCCT AGGTCAGATG GAAGGAAGCA GAGAACAGAT TTTAGAACGA
AGAAAGTATG CTACCAAAGA GGAATGTGAA AACAAACATA CTGCCCTTCT ATTGGAAAGT
AATCAACTTC GCAGTAATCT GGAGCGACTA GAGAAAGAGT TTCATGAATT ACGCTCTCAG
TGGTCGGCAT TAAAGGCTGT TATTGAGGAC AATGAAATTA AAGAAGCGAA ACAAAAGGTT
ACGTTAGAGG AAGAAGAGAA AGCTTATCAA AGGAAACTGA CAGAAACATC CTTTGATTCT
GAAGAAAGCT ATCTTGCTTG TCTTTGGACG GAAGATAAAA TAGAACAGAC ACAAAAAATG
ATCGAAGATT ACGAAAAACA GGTATCTGAA CAACATTTAA TGATAGAAAA GTTGGTTAAC
GAAATTAAAG AAACAGATTC CGTTGATATT CAGATACTAA AAGATAGCCG TGACGAGATT
AACGCTCAAA AATCAGTATG TGAACGTCAG AAAGAGGAAG TAAATCGAAG AATCCGGAAT
AACGATCAGA TTTACAAAGA TGCGAAGAAA CAACTGGAGG CAAAGGGAGA GATACAAAGA
AAGTATCTTA GCATCAATGA ACTTTCTAAA ACAGCAAATG GTGAACTTAC AGGGAAAGTG
AAAATAGCTT TTGAACAGTA TGTACAAGCC TTTTATTTTG ATACTGTCAT TGAAGAAGCA
AATAAGAGAC TTCGTAAGAT GACATTTAGC CAGTATACTC TTCACCGTGC AGACAGTGTT
AACCTAAGAA GCCAGGGTGG ATTAGAAATC TTTGTTCTGG ATCATTACAC CGGAAAGCAA
AGGACTGTAA AGTCTCTTTC AGGAGGCGAG TCATTTAAGG CTGCATTAGC ACTTGCTCTT
GGTTTATCCG ATGTAATTCA AAGTTACGCA GGTGGTATTG AGTTAGATTC GATGTTTATT
GATGAAGGCT TTGGTTCCTT AGATTCTGAG TCTTTAGAAC AGGCGATTGA AACGTTGATT
TCTTTAACTT CTGGAAATAG GTTAGTTGGT ATCATCTCGC ATGTAACAGA ACTAAAAGAG
CGAATTGACA AGAAGATTTT GATTCATAAG ACGATGGAAG GTAGCTATAT CAAATAG
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| Protein sequence | MKPLELAISG FGPFKGEVNV PFEKIGESGL FLISGDTGAG KTTIFDAIAF ALFGCASGEN
RTTDSMRSDY ATGDDKTYVK LVFSHKGRRY EVERNPLYQR AKKRGDGFTE EKPNATLIKW
DGSVVAGYQP VTNEIMEILS IDYKQFKQIA MIAQGEFMKL LTASSEERGV IFRKVFQTGN
YEAMQKKLKS MASELRGECD QLERSMVQYL SGILLSKENE VLEEWKRKPD IHKINDLLEL
LELDLEEDKS RYDTLEVENK ELSGKLVELT TKITLVEEQE KKKQELEQRR LLLEDLRKQS
EQIKLNQIDL QNAKKALYQV KPVADAYHKS RVETENLVRE IIEQKKRFDI VSEETKKKQA
EYHEHEKDKA RLEELAIAIN QCKEELAQFE NLKQLEIKIQ SNLKNQDAIV SNEKKIEEQG
KLLKGDHSEL TKELQGYLSI DQEILECIQI GKDLKSKITK LKSLLDELNR IELESSNLKV
LQQEYFKKEN SYQTANKEYQ TLELAYFREQ AGLLAMNLKG EEPCPVCGST KHPKKAECSK
EAPTEAMLNQ AKVKLESETV VLNQQSLSVS NQNTKISLMW DNLCVVCEEL FEESFGKDKI
KDRITEELSR SEEAFLQKNE EYRVLKKNQE RRDWCNKRTT EISAALEENV QNIQNLNQEK
IAIATVLGQM EGSREQILER RKYATKEECE NKHTALLLES NQLRSNLERL EKEFHELRSQ
WSALKAVIED NEIKEAKQKV TLEEEEKAYQ RKLTETSFDS EESYLACLWT EDKIEQTQKM
IEDYEKQVSE QHLMIEKLVN EIKETDSVDI QILKDSRDEI NAQKSVCERQ KEEVNRRIRN
NDQIYKDAKK QLEAKGEIQR KYLSINELSK TANGELTGKV KIAFEQYVQA FYFDTVIEEA
NKRLRKMTFS QYTLHRADSV NLRSQGGLEI FVLDHYTGKQ RTVKSLSGGE SFKAALALAL
GLSDVIQSYA GGIELDSMFI DEGFGSLDSE SLEQAIETLI SLTSGNRLVG IISHVTELKE
RIDKKILIHK TMEGSYIK
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