Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1155 |
Symbol | |
ID | 5742878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1455562 |
End bp | 1461411 |
Gene Length | 5850 bp |
Protein Length | 1949 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641292260 |
Product | nucleic acid binding OB-fold tRNA/helicase-type |
Protein accession | YP_001558272 |
Protein GI | 160879304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTGAAC TCGATGCGAG CAAAGGATGG CTTGGTGACG GCACCGAAAC ACCAATTGCT GTTACGGATA ATAAGGTGGA GAATCCGGAT AGTAAATATG TGTGGGATCT TAATGTTTCA GGGGATCAGG TGATTTTGAC GGATTCTAAA GGACAGAAAA TTATGCCAAA AGCTGCGGCT ACGAATGGAA TAATGGAAGG TAAATATACA TGGATATTTG TAGAAGAGAG CGTTGGGATC TTTACGATTA ACTCAACAGC TGAAGATGCT GTAATTTTAG CAAGCAATAA AACCTTAAAT AGTGGAGATA ATAAATTTAG AGCTTATAAA GTTGGGACGG TATCAGGTGC TCCAAGTACT TATTTTTCTA AATTTACTCT ATACAAACTA GATGATGGCA TACCATCAGG ACCTGTAAAA ACAGCAACAC CGCAAGCAAG TAAGCCGTCT GGCGTAGTTG CCTCTGGAAG TGCTATTACA CTCTCCTGTA CAACAACAGA TGCGAGCATT CAGTATCGTG CTACGACTGT TTCTCCTTCT GCAATTTGGG TAGATTATAT AGAGCCGATT ATAATTAACA GTGATACAAG AATTGAGGCA AAGGCTACAG CACCGGAGTA TTTAGAAAGT GATATTGTAG TATTTAATTA TGTGCTAGCA AAAGAACCGG AAGTAGACCC AGGTTTATTT GATCCGATTC CTGTAATTCC CGAAGGTGCA ATATCTGTAT TAGAGGCCAG TCAACTAAGC AGCGGTCAAG TTACTGTAGT GGGACAACTT GTTTACCGAT ACGGCAACTA TAATGCGGTG AATACTGCGA TTTTAGAAGA TGTCATTAAT GGACAGATTT ATGCACTGCA GATATTTAAT GCCCTATCCG ACTACAAAAT CGGAGATGTT GTAAAACTAA CCGGAACAAT GGGGGAATAT GGGGGAGTTC CTCAGTTAAG CAACCCTTCA AAAATAGAAG TACTCACACC GGCTGCAAAT ACTCAGTTGA TTCCTGCGCA GAAATTCACT TCATTTAATG AATTGATGGC GGTTAAGGAT TCCTTGTTAT CGGAATGGGT AGTAATTAAG GATGTAACAC TTGGTACATA TAGCAGCAGT GCAAGCACAA AGGTTACGGA TAGCAATGGA GTAAGCATGG ATATATACCG TGCAGCAACC TATCCAATCG GAGTAACAGC CGGCGAAAAG GTCGATCTGT ATGCATGTGT ATCCAAACAT ACTACGACTG ATCAGCTTCG TGTCGGTTAT TCCACTGATT ACGTTATATC AAATGATATG AAAGCTCCGA TAATAACATT ACCTACTTTC GAGAAGGCGG AGTTAGGAAA AGATTATAAA ATATCAATAA CAATTACAGA TAATGTAGCA GTATCCGATG CAGATTTAAC TTATACAGTA AATCAGGTAC CTACTAAGGT GGCTTTGGCA CAGAGCGCTG CTGATAGTAC AAAATGGGAA GTAACCATAC CTGGAAGCAC ATTTACTGCA GGCGTTTCTA GCTATACTGT TCTTGTAACT GCCAGAGACA AGGCAGGCAA TGAGGCAACC AGCAGCGTAA TAATGATTTC TGTAGTAGAT GAACCTCAGG TTACGAAAGT TACACCTGAA CGTAATGGAA AAATAGTGGA TGAAAAGAGA CCGCTTATTA GCATAGCTGC AATAAATCTT GGATTGGCTC CAACTGCAAA GCTTACGTTA AAATCAGGAG AGACTGTTAC TTTAAATGCT GTTAACATGA GCTATTCTGG CGAAACCTTT TCCTATACTC CGTCCAAGGA TCTAGCAGAT GCTCGTTATA CAGCATCCGT AGTGATTACC CGTGCAGATG GAAAAGCTAT AACCTATGAG TGGCCATTTA CCGTAGGTAC ACCAAAATAT AGCTTATACT TTGGACAATT ACATAGTCAC ACAACTTATT CCGATGGTTC TGGTTCCTTA GATGAAGCAC TTAATTATAT TAATAAAATT AGCAAGGGTG ATAATATTGA TTTCGTAGCA TTTACAGATC ACTCTAACTA TTTTGATAAA TCAGGTGCGG CTAACCCAGA AGCTTCTCTT TATAATAAGA GTTTGATGAC GGCAGAAAGT CAAAAAATAT GGAATGAATA TAAGAATAAA ATTGCTGATT TTAATGCATC TTCAACAAAC AGAGGAGTGA TTGCCCTCGG TGGTTTTGAA ATGACTTGGT CAGGCGGACC GGGACATATG AACACCTGGA ACACAGAAGG TATTGTCAGC CGTAATAACA CAATCTTGAA CAACAAAACA AATGATGCCG GAATGAAAGC TTATTATACT TTATTAAGCC AACCAGAAGG TGCTAATTCT GTCAGTCAGT TTAATCACCC AGGCAAAACA TTTGGTACCT TTAGCGATTT TGCTTATTGG GATCCTACCA TTGATTCCCG TATTACTTTA CTTGAAGTTG GTAATGGAGA AGGCGCAATC GGCAGCGGCG GGTATTTCCC ATCTTATAAT TATTACACCA TGGCATTGGA TAAAGGATGG CATGTTGCGC CAACTAATAA TCAGGATAAT CATAAGGGTA AATGGGGAAA TGGAAACGAT GCCCGTGATG TTATCATTAC CGACAACTTT ACGGAACAAG GTATTTATGA TGCATTAAAG GCGCGTAAAG TATATGCAAC GGAAGATAAG AATTTAGAGA TTACCTATAC TGTAAATGAT GAATTAATGG GAAGTATCAT AAAGGAAGTA CCTAAAAGTC TTGATTTAAA GGTAACATTA AGTGATGCGG ACGATATAAT TCAAAAAGCA GAGGTAATTG CAAACAGTGG ACGTATTGTC CATACCTGGG ATGTAAATGC TCAGAGCAAA GAACTTAGCG TAACACTTAG TCCAGAATAT AGCTACTATT ATATCAGAGT AACAGAAAAG GATGGAGACC TTGCAGTAAC GGCACCGGTA TGGATTGGTA ATGCAAAGGT GTTTGGTATC TCCAATGTAG AAAGTGACAC AATAATACCG GTTACCGATG AACCAATGAC GGTAAAAACT ACTTTATTCA ACAGTGAATC AACAGATATT ACTATTAAGT CTATGGCTTA TAGTTTAGAT GGAAAAATTA TTGATTTAAA AACGAGTGTA GGTACTGTTG CAAAAGGAAC GACTCAGGTA ATTAACTATT CGTTTAAACC TACCAAAGCA AAGGTACAGA CCCTAAATGT TGAAGTTGTT ATGACCTTAG ATGGCATTGA CTACAGCTTT ACAAAGGACC TTAGCTTAGA TGTGAGAGAT GCTAATAAGC TGGTATACAT AGGAATTGAC GGAAGTCATT TTAATGAATA TGTGGCTGGT AATTACAAAG ATTCTATGGG CAACTTTGGA AAACTCGCTG CAGAAAGTAA TGTAAGATGT GTGGTTCTTA ACACCAGTGA ACAATTATTA GAGGCAGCTA AAAATGAGAA TGGTAAGTAT AAGATGCTTA TATTAACAGC ACCAAGCCGT CGTGATGGTA CTAAATTAAG AAATCCATAT CTCAATTACT CAGCTGGGGA GATAGCAGCA ATTAAAGGTT TCTCAGAAGC AGGGGGAAGT TTAGTACTTT GTGGCTGGTC AGACTTATAC GAGAATTATG GAGCTTTTCC GGCAGAGGAC CATATGGCAG CACAGCAGAA TAAATTATTA GAAGCAGTTG GAGCTTCTCT ACGCATTAGT GATGATGGAG CTTATGATGA TGTATTAAAT GCTGGTGGAA GTGAAGCCAA TAAAGCAAGA TTATATTTAT CCACCTATAA TTGGGAGAAT CCATTTACAC AAGGTATTGA ATTCGATAAA GATAATCCAA ATGATAATAT GCATTCACAA CTCTTTAGTC AATATGGTGG CGGTACAATT CATGTGGTAG ATAAGAATGG AAATGCTACC TCTACACTAC CAGAGAATAT TTCTCCAATT GTATGGGGAC ATAGTACTAC CTATTCAAAG GATTGCGATA ATGATCATCT TGGTGGAAGC GCTATACCAA AATATGAATA TGCACAAGGT GATAATCGTC TGATGGTACT TGCAAGTGAG ACTGTGACAC ATGCAAATGG AACTCAATCA CTAGTGATTG TAGATGGTGC AGCATTTATG AGTAATTTTG AAATCCAAGC TACATTAGAT AATACTGTAG AAAAAAATTA TTCAAATTAT ACAATTTTAC AAAACTTAAT CCAGTATGCA AATCCGACAC AGATTGATAA GATTGCAGAT GTACAAAAAG AAGCAGAAGA AGGTGTTAAA TTTTCAGTAG AAGGTATCGT AACTTCCAAT GCTTCTGGAT ATGATAAGCC TACTGCATTT TTTGACTGTA TCTATCTACA GGACGAAACA GCTGGTATTA ATGCATTCCC AGTGGCAGGA GACTTTAAAG TTGGTCAGAA GGTTCGAATT ACGGGAACAT CTTCTTCTTA TCAGGGAGAA AGACAGTTAA ATGTTAGCAG TATATCCCTG GTAGATAGTA ATATTACAAA AATAGAACCT AAAGAAGTAA CTGCAAAGCA GATTAATGAT AGAACATACC TTGGAAGCCT TGTAAAGATT TCAGGAAAGG TAACAAAGGT TGAACTTGAA AACGGAGCTG TCCAGACGAT TCTTGTTCAG GATAACGCTG GAAACACTGC TCGTATCTTT ATTGATGGCT ATATTACAAC CGACAAGGAA ATTATAGATT TAGTTGTTGG AAGCTTGATT ACTGCTGTTG GTCTGTCCTC TTATGATAAT ACCTTTGATG GTCTTGCAGC GCGTATTCGT ATTAGAGATC GTGGGGATAT TGTATGTAAG CGTGATGATA CACCAACACC AACATCAACA CCAACACCAA CGCCTACGAC AACACCAACG CCAACACCGA AACCTGAGGG TCAAACTGTA ATAACAGTTG ATAAAGCAGA AGTTACCATC GTGGGTGGAA AAGCAAATGT AAAAATAATA ATCAGTGAAG AAGTCCTGAA AGATGTGGTG AAAAATGGTA ATAAAAACAT TACAATTTCA TTAGGGAAAG AAGTATTAAA GGATATTATA TCGAATAGCC AGGTTAAAAA GGGTATAGTA ATCGACTTGT CCATTCCTTC TGTTAAAGAT GCAAATGTGA ATAACATTGT ATTAAGTAAA GATACATTGT TATTAGCAAA GAAATCCGGA CAGAAGCTTA CTATCAATGT AGCATTTGGA AAGGGTTACA CAGTTGATAT TCCTGTATCT GAACTGAAGA AAGTTGCATT TGTTTCAAAA GATCTGAATA TAGCAGTTAC CTTGAAGAAA GATACGAAAG CAGCTGCAAA ATCAGTAGGA ATCCTTTCCG TAGGAACGGA AGGTAAGTTA ACAACAGGTA TGGTAGTTAC AGTGCCTGTG AAAGGTACAC TTTCCTTATC AGCAGATAAA AAGGTATATA TTTACCATAA AAATGCTAAG ACCGGTGCAT TGGAAGAAAT GCCAAACAAT CCAAGAACCG TAGCAGCGGA TGGTACCATA AAACTTTCTA CCCTAAGCGG AGGAGATTTT GTTATTTGCA CAGCGAAGGT AAAGGATGCA GTAACATTAG TAGACAGGGT GAAAGTAACC GTTGAATCTA CCGTTGCTAA AGGTGAAAAA ATCAATGTAA AGGTAGCTCT TCCACAGGAA TTAGCGCGAG TTACTGCATT TACAAAAGGT GATCCGGTTG GTCAGGAAGA AGTAAAGGTA ACATATAAAG TAAGCGATAA GAATATTGCA ACTGTATCCA GTAATGGAAC TATTACTGCT AAGAAGAAAG GAACCATTAA GTTAACAGTT GTAATTACCT TAGAGAATGG AGAAAAGAAG AACTTTAACA AAACTATCAA AGTAAACTAG
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Protein sequence | MPELDASKGW LGDGTETPIA VTDNKVENPD SKYVWDLNVS GDQVILTDSK GQKIMPKAAA TNGIMEGKYT WIFVEESVGI FTINSTAEDA VILASNKTLN SGDNKFRAYK VGTVSGAPST YFSKFTLYKL DDGIPSGPVK TATPQASKPS GVVASGSAIT LSCTTTDASI QYRATTVSPS AIWVDYIEPI IINSDTRIEA KATAPEYLES DIVVFNYVLA KEPEVDPGLF DPIPVIPEGA ISVLEASQLS SGQVTVVGQL VYRYGNYNAV NTAILEDVIN GQIYALQIFN ALSDYKIGDV VKLTGTMGEY GGVPQLSNPS KIEVLTPAAN TQLIPAQKFT SFNELMAVKD SLLSEWVVIK DVTLGTYSSS ASTKVTDSNG VSMDIYRAAT YPIGVTAGEK VDLYACVSKH TTTDQLRVGY STDYVISNDM KAPIITLPTF EKAELGKDYK ISITITDNVA VSDADLTYTV NQVPTKVALA QSAADSTKWE VTIPGSTFTA GVSSYTVLVT ARDKAGNEAT SSVIMISVVD EPQVTKVTPE RNGKIVDEKR PLISIAAINL GLAPTAKLTL KSGETVTLNA VNMSYSGETF SYTPSKDLAD ARYTASVVIT RADGKAITYE WPFTVGTPKY SLYFGQLHSH TTYSDGSGSL DEALNYINKI SKGDNIDFVA FTDHSNYFDK SGAANPEASL YNKSLMTAES QKIWNEYKNK IADFNASSTN RGVIALGGFE MTWSGGPGHM NTWNTEGIVS RNNTILNNKT NDAGMKAYYT LLSQPEGANS VSQFNHPGKT FGTFSDFAYW DPTIDSRITL LEVGNGEGAI GSGGYFPSYN YYTMALDKGW HVAPTNNQDN HKGKWGNGND ARDVIITDNF TEQGIYDALK ARKVYATEDK NLEITYTVND ELMGSIIKEV PKSLDLKVTL SDADDIIQKA EVIANSGRIV HTWDVNAQSK ELSVTLSPEY SYYYIRVTEK DGDLAVTAPV WIGNAKVFGI SNVESDTIIP VTDEPMTVKT TLFNSESTDI TIKSMAYSLD GKIIDLKTSV GTVAKGTTQV INYSFKPTKA KVQTLNVEVV MTLDGIDYSF TKDLSLDVRD ANKLVYIGID GSHFNEYVAG NYKDSMGNFG KLAAESNVRC VVLNTSEQLL EAAKNENGKY KMLILTAPSR RDGTKLRNPY LNYSAGEIAA IKGFSEAGGS LVLCGWSDLY ENYGAFPAED HMAAQQNKLL EAVGASLRIS DDGAYDDVLN AGGSEANKAR LYLSTYNWEN PFTQGIEFDK DNPNDNMHSQ LFSQYGGGTI HVVDKNGNAT STLPENISPI VWGHSTTYSK DCDNDHLGGS AIPKYEYAQG DNRLMVLASE TVTHANGTQS LVIVDGAAFM SNFEIQATLD NTVEKNYSNY TILQNLIQYA NPTQIDKIAD VQKEAEEGVK FSVEGIVTSN ASGYDKPTAF FDCIYLQDET AGINAFPVAG DFKVGQKVRI TGTSSSYQGE RQLNVSSISL VDSNITKIEP KEVTAKQIND RTYLGSLVKI SGKVTKVELE NGAVQTILVQ DNAGNTARIF IDGYITTDKE IIDLVVGSLI TAVGLSSYDN TFDGLAARIR IRDRGDIVCK RDDTPTPTST PTPTPTTTPT PTPKPEGQTV ITVDKAEVTI VGGKANVKII ISEEVLKDVV KNGNKNITIS LGKEVLKDII SNSQVKKGIV IDLSIPSVKD ANVNNIVLSK DTLLLAKKSG QKLTINVAFG KGYTVDIPVS ELKKVAFVSK DLNIAVTLKK DTKAAAKSVG ILSVGTEGKL TTGMVVTVPV KGTLSLSADK KVYIYHKNAK TGALEEMPNN PRTVAADGTI KLSTLSGGDF VICTAKVKDA VTLVDRVKVT VESTVAKGEK INVKVALPQE LARVTAFTKG DPVGQEEVKV TYKVSDKNIA TVSSNGTITA KKKGTIKLTV VITLENGEKK NFNKTIKVN
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