Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0929 |
Symbol | |
ID | 5741801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1184776 |
End bp | 1185768 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641292040 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001558052 |
Protein GI | 160879084 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.293677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGC AGACGAGAAA GGAGGAGCCA GAGATGTCGA AAGTGAAGTC GATGGAAAAA ATGGAGAGAA AAAAGAGAAA AAAGAAGGAT ATTAGTATCT TGCAGCAATA TTATAAATGC AGATATTTAT TCTTTCTATT AATACCGACT ATAGTTTATT TTGTTATATT CCATTATGTT CCAATGTATG GTGTCATCAT CGCCTTTAAG GAGTTCTATC CATTAAAGGG GATTATGGGA AGTGAATGGA TCGGGTTGGC TAATTTTAAA AAGTTGTTTA CCGGGGTTTA TTTTCTACCG GTGCTTAGAA ATACGCTGAT TATCAGTTTT GCCAAGTTGA TAGTAGGATT TCCGATGCCT ATCATTCTAA GTATCTTATT AAATGAAGTA CGATGTAAAT GGTTTAAAAA AGGAGTACAA ACGATTGCCT ATTTACCACA TTTTATCGGT TGGGTTCTAC TAGCCGGAAT TGTGCAACAG GTGTTGTCAC CCTCTACTGG AATGGTAAAT TATCTGATTC AGCAATTTGG TGGGGAACCT ATATTTTTTA TGGGAAGTAA AGCGTGGTTT CGCCCAATTG TTGTATTATC TAGTATTTGG AGAAATTGTG GATGGCAGAG TGTAATTTTT ATGGCGGCAA TTATGGGGAT TGATTCACAG CTTTACGAAG CGGCTGATTT GGATGGAGCA GGGCGGCTTC AGAAGATAAT GCATGTGACA CTTCCATGTA TTATACCTAC GATTATTATT ATGTTTATTT TTGCTATAGG AGGGGTTATG AATGATGATT TTGATCAGAT TTATAACATG CTAAATGCAA GAGTAATGTC AGTGGGAGAT GTAATAGGAA CCTATACTTA CAGGGTAGGT CTACAGCAGA TGGATTATGG ATATGCAACT GCGGTAGGAC TCTTTAAAAA TGTGATAGCT TTGATTTTGA TTACGACAAG TAACTTCTTT TCCAGAAAAT TGAGCGGAAG TTCATTATGG TAA
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Protein sequence | MAEQTRKEEP EMSKVKSMEK MERKKRKKKD ISILQQYYKC RYLFFLLIPT IVYFVIFHYV PMYGVIIAFK EFYPLKGIMG SEWIGLANFK KLFTGVYFLP VLRNTLIISF AKLIVGFPMP IILSILLNEV RCKWFKKGVQ TIAYLPHFIG WVLLAGIVQQ VLSPSTGMVN YLIQQFGGEP IFFMGSKAWF RPIVVLSSIW RNCGWQSVIF MAAIMGIDSQ LYEAADLDGA GRLQKIMHVT LPCIIPTIII MFIFAIGGVM NDDFDQIYNM LNARVMSVGD VIGTYTYRVG LQQMDYGYAT AVGLFKNVIA LILITTSNFF SRKLSGSSLW
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