Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0912 |
Symbol | |
ID | 5741784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1164154 |
End bp | 1164624 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641292024 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001558036 |
Protein GI | 160879068 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.050777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAGAT ATTACAAGGA TATTTTTGTG TATGTGTATC GGCAGACTCA AAATGAAGAA CTTTCTAAGG ACTTAACCCA GGAGATATTT ATTGCAATGT TAAAGTCAAT TGAGGGCTTT GATGCAAAGA GGGCCTCATT TAAAACTTGG TTGTATAAAA TAGCGAGTAA TAAGATTATA GATAGTTATC GTTCTACCTA TTATAAGTAT GTTACCGTTG TGGAGGAAAT TGAGGAGGGG CGGAGCAGTT CTTTAAGCAT GGAAGATTTG GTTGTATTAA AGGAAGAGAC AAATGATATT TTGGATATCA TCAGTACATT GTCTACTAGT ATTCAGCAGA TTATTCGACT TAAAATCTTT GGTGAAATGA CATTTGCGGA GATTGGTTTG TTGCTTGAAC TATCAGAATC TACCGTAAAA TCAAAATATT ATGCAGCGGT GAAAAAAATA AAGAAAGTAA TGGAGGTGTA G
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Protein sequence | MQRYYKDIFV YVYRQTQNEE LSKDLTQEIF IAMLKSIEGF DAKRASFKTW LYKIASNKII DSYRSTYYKY VTVVEEIEEG RSSSLSMEDL VVLKEETNDI LDIISTLSTS IQQIIRLKIF GEMTFAEIGL LLELSESTVK SKYYAAVKKI KKVMEV
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