Gene Cphy_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0912 
Symbol 
ID5741784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1164154 
End bp1164624 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content35% 
IMG OID641292024 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001558036 
Protein GI160879068 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.050777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAGAT ATTACAAGGA TATTTTTGTG TATGTGTATC GGCAGACTCA AAATGAAGAA 
CTTTCTAAGG ACTTAACCCA GGAGATATTT ATTGCAATGT TAAAGTCAAT TGAGGGCTTT
GATGCAAAGA GGGCCTCATT TAAAACTTGG TTGTATAAAA TAGCGAGTAA TAAGATTATA
GATAGTTATC GTTCTACCTA TTATAAGTAT GTTACCGTTG TGGAGGAAAT TGAGGAGGGG
CGGAGCAGTT CTTTAAGCAT GGAAGATTTG GTTGTATTAA AGGAAGAGAC AAATGATATT
TTGGATATCA TCAGTACATT GTCTACTAGT ATTCAGCAGA TTATTCGACT TAAAATCTTT
GGTGAAATGA CATTTGCGGA GATTGGTTTG TTGCTTGAAC TATCAGAATC TACCGTAAAA
TCAAAATATT ATGCAGCGGT GAAAAAAATA AAGAAAGTAA TGGAGGTGTA G
 
Protein sequence
MQRYYKDIFV YVYRQTQNEE LSKDLTQEIF IAMLKSIEGF DAKRASFKTW LYKIASNKII 
DSYRSTYYKY VTVVEEIEEG RSSSLSMEDL VVLKEETNDI LDIISTLSTS IQQIIRLKIF
GEMTFAEIGL LLELSESTVK SKYYAAVKKI KKVMEV